Evidence map›Paper›PMID 40657429›Full record

ArticleEuropean heart journal. Imaging methods and practice2024

Deep learning-based segmentation and strain analysis of left heart chambers from long-axis CMR images.

Jonas Leite, Emilie Bollache, Vincent Nguyen, Moussa Gueda Moussa, Thomas Wallet, Mikaël Prigent, Khaoula Bouazizi, Mohamed Zarai, Jérôme Lamy, Perrine Marsac and 8 more

Abstract read
In one paragraph

Article in European heart journal. Imaging methods and practice, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Jonas LeiteLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Emilie BollacheLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Vincent NguyenLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Moussa Gueda MoussaLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Thomas WalletLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Mikaël PrigentSorbonne Université, Institute of Cardiometabolism and Nutrition (ICAN), Paris, France.
Khaoula BouaziziLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Mohamed ZaraiSorbonne Université, Institute of Cardiometabolism and Nutrition (ICAN), Paris, France.
Jérôme LamyEuropean Hospital Georges Pompidou, Assistance Publique - Hôpitaux de Paris (AP-HP)/PARCC, Université Paris-Cité, INSERM, Paris, France.
Perrine MarsacLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Niki ProcopiSorbonne Université, ACTION group, Pitié-Salpêtrière Hospital (AP-HP), Paris, France.
Michel ZeitouniSorbonne Université, ACTION group, Pitié-Salpêtrière Hospital (AP-HP), Paris, France.
Alban RedheuilLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Antonio GalloLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Elie MousseauxEuropean Hospital Georges Pompidou, Assistance Publique - Hôpitaux de Paris (AP-HP)/PARCC, Université Paris-Cité, INSERM, Paris, France.ORCID https://orcid.org/0000-0002-9893-9694
Gilles MontalescotSorbonne Université, ACTION group, Pitié-Salpêtrière Hospital (AP-HP), Paris, France.
Thomas DietenbeckLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.
Nadjia KachenouraLaboratoire D'Imagerie Biomédicale (LIB), Sorbonne Université, INSERM, CNRS, Paris, France.ORCID https://orcid.org/0000-0002-5269-3246

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aims: Feature tracking (FT) is increasingly used on dynamic cardiac magnetic resonance (CMR) images for myocardial strain evaluation but often requires manual initialization, which is tedious and source of variability, especially on the challenging long-axis (LAX) images. Accordingly, we designed a pipeline combining deep learning (DL) with FT for left ventricular (LV) and left atrial (LA) longitudinal myocardial strain estimation. Methods and results: We studied a multivendor database of 684 individuals divided into: training = 845, tuning = 281, and testing = 116 LAX-CMR cine 2- and/or 4-chamber views. Images were centre cropped. Then, a 2D- and 3D-ResUnet, which considers time as the third dimension, were designed for LV/LA segmentation and used to (i) estimate LV and LA strains (Full 2D-/3D-DL) and (ii) initialize an FT algorithm and further derive LV and LA strains (FT-initialized by 2D-/3D-DL). Left ventricular and LA contours and strain peaks were compared against reference standard (RS) measures performed by an expert using a semiautomated software. Intraclass-correlation-coefficient (ICC) was used to study reproducibility. 3D-DL outperformed 2D-DL segmentation (Dice-scores: 0.94 ± 0.02 vs. 0.90 ± 0.09, Conclusion: Generalizable DL-based LV and LA segmentation on LAX-CMR images was proposed. Its combination with FT resulted in fully automated and reliable LV and LA strain measures, reaching human reproducibility.

Indexed as

CMRdeep learningfeature trackingleft atriumlongitudinal strain

Identifiers

PMID40657429
PMCPMC12256142

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.