Evidence map›Paper›PMID 40654714›Full record

ArticlebioRxiv : the preprint server for biology2025

Profiling Bile Acids in the Stools of Humans and Animal Models of Cystic Fibrosis.

Melissa M Carmichael, Rebecca A Valls, Shannon Soucy, Julie Sanville, Juliette Madan, Sarvesh V Surve, Mark S Sundrud, George A O'Toole

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Melissa M CarmichaelDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, 03755.
Rebecca A VallsDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, 03755.
Shannon SoucyDepartment of Biomedical Data Science, Geisel School of Medicine, Hanover, NH, 03755, USA.
Julie SanvilleDepartment of Pediatrics, Dartmouth Health, Lebanon, NH 03766.
Juliette MadanDepartment of Pediatrics, Dartmouth Health, Lebanon, NH 03766.
Sarvesh V SurveDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, 03755.
Mark S SundrudDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, 03755.ORCID 0000-0002-4249-0525
George A O'TooleDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, 03755.ORCID 0000-0002-2861-4392

Funding

Zhao - Proj 2P20GM130454 · NIGMS · DARTMOUTH COLLEGE · PI MICHAEL L WHITFIELD · 2019 to 2026
$27.2M
Translational Research CoreP30DK117469 · NIDDK · DARTMOUTH COLLEGE · PI DEAN R MADDEN · 2018 to 2026
$13.9M
HOST-MICROBE INTERACTIONST32AI007519 · NIAID · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 1997 to 2026
$5.9M
Nuclear Receptor Control of T Cell Function in Discrete Intestinal MicroenvironmentsR01AI164772 · NIAID · UNIVERSITY OF FLORIDA · PI SUNDRUD, MARK SCOTT, WEAVER, CASEY T · 2021 to 2025
$4.5M
Nuclear Receptor Networks in Mucosal Immune RegulationU01AI163063 · NIAID · UNIVERSITY OF FLORIDA · PI PIPKIN, MATTHEW EUGENE, SUNDRUD, MARK SCOTT · 2021 to 2025
$2.2M
Dartmouth Cystic Fibrosis Training ProgramT32HL134598 · NHLBI · DARTMOUTH COLLEGE · PI George A. O'Toole · 2017 to 2026
$1.7M
NATIONAL FERRET RESOURCE AND RESEARCH CENTER ON LUNG DISEASE75N92024C00008 · NHLBI · UNIVERSITY OF IOWA · PI BOYLE, JESSICA · 2024 to 2024
$1.7M
Arsenic, the Microbiome & Health Outcomes: Mechanisms to Methods of InterventionR01ES033988 · NIEHS · DARTMOUTH COLLEGE · PI George A. O'Toole · 2023 to 2026
$1.6M
NHLBI NIH HHS 75N92024C00008NHLBI NIH HHS T32 HL134598NIAID NIH HHS R01 AI164772NIAID NIH HHS T32 AI007519NIAID NIH HHS U01 AI163063NIDDK NIH HHS P30 DK117469NIEHS NIH HHS R01 ES033988NIGMS NIH HHS P20 GM130454
6 · The paper itself

Abstract

Cystic fibrosis (CF) is associated with dysbiosis of the gut microbiome, alterations in intestinal mucus production, aberrant bile acid (BA) metabolism, fat malabsorption, and chronic inflammation. As little is known about BAs in CF, we performed both comprehensive and targeted BA profiling in stool of children with or without CF. Our results reveal that select BA species and metabolites are significantly different between children with CF (cwCF) and healthy controls. There is also a trend towards higher primary cBA and total BA levels for cwCF. Matched bacterial metagenomic analyses showed no change in alpha-diversity between groups in our small cohort, at odds with previous studies, whereas changes in relative abundance of

Indexed as

bile acidscystic fibrosisferrethumanmouse

Identifiers

PMID40654714
PMCPMC12248097

What OpenQuestion holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.