Evidence map›Paper›PMID 40653420›Full record

ReviewTrends in biochemical sciences2025

Proteasome-derived peptides: separating the trash from the recycling.

Anna Brennan, Taylor R Church, Seth S Margolis

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anna BrennanDepartment of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. Electronic address: abrenn19@jhmi.edu.
Taylor R ChurchDepartment of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Seth S MargolisDepartment of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Solomon H. Snyder Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. Electronic address: smargol7@jhmi.edu.

Funding

Mechanisms Regulating Neuronal Specific Proteasomes in NeurodegenerationR01NS110754 · NINDS · JOHNS HOPKINS UNIVERSITY · PI MARGOLIS, SETH S · 2019 to 2023
$2.0M
The Role of the Neuronal Membrane Proteasome in the Peripheral Nervous System and Pain SensationF31NS134239 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Taylor Renne Church · 2023 to 2026
$196k
NINDS NIH HHS F31 NS134239NINDS NIH HHS R01 NS110754
6 · The paper itself

Abstract

The proteasome is an essential protein complex in all cells. Proteasomes have two main functions: protein degradation and peptide generation. While proteasome-dependent protein degradation removes proteins and is critical for cellular function, the newly generated proteasome-derived peptides, which range in size and sequence, are emerging as essential cellular effector molecules: they are expressed on MHC-I in the immune system, function as novel modulators of neuronal signaling, are involved in innate immunity and intracellular signaling, and can be metabolized further for important cellular processes. Here, we take a comprehensive look at the mechanics behind proteasome-mediated peptide generation; the function of proteasome-derived peptides in signaling and metabolism relevant to cellular biology, health, and disease; and the techniques enabling these studies.

Indexed as

PeptidesProteasome Endopeptidase ComplexAnimalsHumansProteolysisSignal TransductionPeptidesProteasome Endopeptidase Complexamino acid recyclingantimicrobial peptidesimmunoproteasomeneuronal membrane proteasomepeptidesproteasome-derived peptides

Identifiers

PMID40653420
PMCPMC12326881

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.