Evidence map›Paper›PMID 40652216›Full record

ArticleBMC research notes2025

Transcriptome sequencing reveals significant RNA variation in human sperm samples.

Weiming Chen, Lei Yu, Zhenyu Jia, Jianguo Zhu

Abstract read
In one paragraph

Article in BMC research notes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Weiming ChenGuizhou university medical school, South Jiaxiu Rd, Guiyang city, Guizhou province, China.
Lei YuGenetics, Genomics and Bioinformatics Graduate Program, University of California, Riverside, CA, USA.
Zhenyu JiaGenetics, Genomics and Bioinformatics Graduate Program, University of California, Riverside, CA, USA. zhenyuj@ucr.edu.
Jianguo ZhuGuizhou provincial people's hospital, East Zhongshan Rd, Guiyang city, Guizhou province, China. jgzhu@gzu.edu.cn.

Funding

National Natural Science Foundation of China 81873608Social Development Program of Guizhou Provincial Science and Technology Department [2019]2799
6 · The paper itself

Abstract

DNA transcription and protein translation are non-coupled for life activities after sperm formation, and if the RNA profile of isolated spermatozoa is resolved, it will help men with epigenetic effects on their offspring and male infertility due to RNA disorders. However, the significance of RNA identity, quantity, and quality in sperm biology and their implications for male fertility are not well understood. We collected 83 semen samples, including with normal sperm motility and with asthenospermia, a condition characterized by reduced sperm motility, for transcriptome sequence. Due to the inherently low RNA content in sperm, only 37 samples were successfully sequenced. Among these, 15 samples met high-quality standards with an RNA Integrity Number (RIN) greater than 6 and a 28 S/18S ratio greater than 0.7, while 22 samples had a RIN between 5 and 6 with a 28 S/18S ratio greater than 0.7. To foster broader research, we have made the RNA sequencing data of these two sets of samples publicly available in the GSA-Human database, under accession numbers HRA006250 and HRA006906, respectively. The data could help develop new algorithms to parse the RNA landscape retained after sperm formation, while potentially discovering new molecular markers of weak asthenospermia.

Indexed as

AsthenozoospermiaRNASpermatozoaTranscriptomeAdultGene Expression ProfilingHumansMaleSequence Analysis, RNASperm MotilityRNAAsthenospermiaRNA-seqSperm

Identifiers

PMID40652216
PMCPMC12255995

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.