Evidence map›Paper›PMID 40646718›Full record

ArticleGenetics2025

Analysis of a BCOR internal tandem duplication in mouse embryonic stem cell to neuronal precursor differentiation.

Zuzer Dhoondia, Hyuckjoon Kang, Kwangwoon Lee, Philip A Cole, Mitzi I Kuroda

Abstract read
In one paragraph

Article in Genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zuzer DhoondiaDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02215, United States.ORCID 0000-0002-0390-8140
Hyuckjoon KangDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02215, United States.
Kwangwoon LeeDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02215, United States.
Philip A ColeDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02215, United States.
Mitzi I KurodaDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02215, United States.

Funding

Epigenetic regulation of transcriptional programmingR35GM126944 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI KURODA, MITZI I · 2018 to 2022
$3.3M
Epigenetic regulation of transcriptional programmingR35GM152063 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI Mitzi I Kuroda · 2024 to 2026
$2.0M
Chemical Approaches to Understanding Reversible Lysine ModificationsR35GM149229 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI PHILIP A COLE · 2023 to 2026
$1.9M
National Institute of General Medical Sciences of the National Institutes of Health R35GM126944National Institute of General Medical Sciences of the National Institutes of Health R35GM149229National Institute of General Medical Sciences of the National Institutes of Health R35GM152063NIGMS NIH HHS R35 GM126944NIGMS NIH HHS R35 GM149229NIGMS NIH HHS R35 GM152063
6 · The paper itself

Abstract

BCOR (BCL-6 corepressor) is a component of variant Polycomb Repressive Complex 1.1 (vPRC1.1), one of several vPRC1 complexes that catalyze histone H2A ubiquitination thought to play an important role in PRC2 binding and the deposition of H3K27me3 to silence genes. The PCGF Ub-like fold discriminator (PUFD) domain at the C-terminus of BCOR forms a heterodimer with PCGF1, serving as a critical interface for its polycomb-dependent functions. Internal tandem duplication (ITD) mutations in BCOR, causing in-frame duplications of 20 to 40 amino acids in the PUFD domain, are observed in heterogeneous tumors including sarcomas (kidney, bone, and endometrium) and neuroepithelial tumors in the brain. To dissect the molecular mechanisms underlying aberrant function of BCOR-ITD mutants, we employed mouse embryonic stem (mES) cells expressing either transgenic or endogenous BCOR-ITD. Our results indicate that the BCOR-ITD mutation does not disrupt the BCOR-PCGF1 interaction, instead maintaining the integrity of the vPRC1.1 complex. While displaying subtle changes in imprinted gene expression during differentiation toward a neural lineage, BCOR-ITD mutants also had no growth phenotype in culture. Furthermore, we found that CD24+ cells were enriched, as expected, during neural progenitor differentiation in both wildtype and mutant cells. However, sensitization of BCOR-ITD mES cells with EZH2 inhibitor during differentiation resulted in an unexpected enrichment of a CD24+CD26+ subpopulation, indicating aberrant cell fate that was also prevalent in a BCOR truncation mutant. Together, our results suggest that BCOR-ITD may largely retain wildtype function, but with increased susceptibility to synergistic stress on the Polycomb pathway.

Indexed as

Cell DifferentiationGene DuplicationMouse Embryonic Stem CellsProto-Oncogene ProteinsRepressor ProteinsTandem Repeat SequencesAnimalsMiceMutationNeuronsPolycomb Repressive Complex 1Bcor protein, mousePolycomb Repressive Complex 1Proto-Oncogene ProteinsRepressor ProteinsBCOR-ITDBioTAP-XLPUFDvPRC1.1

Identifiers

PMID40646718
PMCPMC12875675

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.