Evidence map›Paper›PMID 40646697›Full record

ArticleGenes, chromosomes & cancer2025

Molecular Classification of Resected Primary Duodenal Adenocarcinoma.

Jacob de Bakker, Hedde Biesma, Tanya Soeratram, Jacqueline Egthuijsen, Tim de Back, Marc Besselink, Louis Vermeulen, Bauke Ylstra, Nicole van Grieken, Geert Kazemier

Abstract read
In one paragraph

Article in Genes, chromosomes & cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jacob de BakkerDepartment of Surgery, Amsterdam UMC, Location Vrije Universiteit, Amsterdam, the Netherlands.ORCID 0000-0002-3017-0882
Hedde BiesmaCancer Center Amsterdam, Amsterdam, the Netherlands.
Tanya SoeratramCancer Center Amsterdam, Amsterdam, the Netherlands.ORCID 0000-0001-5345-0150
Jacqueline EgthuijsenCancer Center Amsterdam, Amsterdam, the Netherlands.
Tim de BackCancer Center Amsterdam, Amsterdam, the Netherlands.ORCID 0000-0002-5205-8031
Marc BesselinkCancer Center Amsterdam, Amsterdam, the Netherlands.
Louis VermeulenCancer Center Amsterdam, Amsterdam, the Netherlands.
Bauke YlstraCancer Center Amsterdam, Amsterdam, the Netherlands.ORCID 0000-0001-9479-3010
Nicole van GriekenCancer Center Amsterdam, Amsterdam, the Netherlands.
Geert KazemierDepartment of Surgery, Amsterdam UMC, Location Vrije Universiteit, Amsterdam, the Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe molecular and histological characteristics of primary duodenal adenocarcinoma (DA) have been poorly described, which hampers the development of new treatment options. This study aimed to characterize the landscape of chromosomal copy number aberrations (CNAs), microsatellite instability status, and tumor-stroma content, and their association with clinicopathological characteristics of patients with DA.

methodsDNA was extracted from tumor tissues of patients who underwent a primary surgical resection for DA in a single center (2000-2019). Shallow whole genome sequencing (sWGS) was performed to identify chromosomal CNAs and the genomic instability index (GII), for which 25% of the genome was altered, was used to classify tumors as CNA

resultsAmong 74 patients with resected DA, sWGS identified 39 (52.7%) CNA

conclusionAbout half of resected DAs had CNA

Indexed as

AdenocarcinomaDuodenal NeoplasmsAdultAgedAged, 80 and overBiomarkers, TumorDNA Copy Number VariationsFemaleHumansMaleMicrosatellite InstabilityMiddle AgedPrognosisBiomarkers, Tumorcopy number aberrationsdigital image analysisduodenum adenocarcinomamicrosatellite instabilitymolecular subgroupstumor–stroma

Identifiers

PMID40646697
PMCPMC12254436

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.