Evidence map›Paper›PMID 40646471›Full record

ArticleBMC genomics2025

Genome-wide association studies and candidate genes networks affecting reproductive traits using Iranian Holstein sequence data.

Narges Maddahi, Mostafa Sadeghi, Seyed Reza Miraee Ashtiani, Muna Kholghi, Ali Jalil Sarghale

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Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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2 citing papers in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

Narges MaddahiDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.
Mostafa SadeghiDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. sadeghimos@ut.ac.ir.
Seyed Reza Miraee AshtianiDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.
Muna KholghiDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.
Ali Jalil SarghaleDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe reproduction process in domestic animals is one of the most important challenges of animal husbandry. Fertility is an important trait that contributes to herd profitability and can be improved by genomic information. One of the best ways to investigate the association between single nucleotide polymorphisms (SNPs) and phenotypic performance is the genome-wide association study (GWAS). The aim of our study was to identify the genomic regions affecting reproductive traits, interval between first and last insemination (IFL), days open (DO), days from calving to first service (DFS), number of services per conception (NSPC), age at first calving (AFC) and age at first insemination (AFI) using SNP chip data in Iranian Holstein cows.

resultsGWAS analysis for all reproductive traits based on the significant-association threshold P < 1 × 10

conclusionsOur results identified 55 marker-trait associations (MTAs) and 54 different candidate genes associated with reproductive traits. As a result, the SNPs and candidate genes discovered in this study can be used in genomic experiments to improve the reproductive performance of Iranian Holstein dairy cows and provide new information about the genetic architecture of these traits.

Indexed as

Gene Regulatory NetworksGenome-Wide Association StudyReproductionAnimalsCattleFemaleIranPhenotypePolymorphism, Single NucleotideQuantitative Trait LociCandidate genesIranian Holstein cattleReproductive traitsWhole-genome sequence

Identifiers

PMID40646471
PMCPMC12247366

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