Evidence map›Paper›PMID 40646456›Full record

ArticleBMC plant biology2025

Genome-wide identification of castor bean class III peroxidase genes and analysis of expression patterns under abiotic stresses.

Jiayu Li, Mubo Fan, Shuqi Yang, Hongyan Huo, Weiquan Fan, Shiyou Lü, Jixing Zhang

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jiayu LiCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Mubo FanCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Shuqi YangCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Hongyan HuoCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Weiquan FanCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Shiyou LüInner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, 028000, China.
Jixing ZhangCollege of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China. zjx-711209@163.com.

Funding

Inner Mongolia Collaborative Innovation Center for Castor Industry MDK2023083, MDK20230779, MDK2023077National Natural Science Foundation of China 31760399
6 · The paper itself

Abstract

backgroundThe peroxidase (PRX) gene family plays important roles in plant growth and development, antioxidant defense, immune response, cell wall synthesis, and environmental stress response. However, the genome-wide identification and analysis of PRX in castor bean (Ricinus communis L.) have not been comprehensively analyzed.

resultsBased on the data, the PRX gene family in castor bean genome was identified genome-wide and analyzed by bioinformatics methods. Sixty-three members of the PRX gene family were identified in castor bean. These genes were unevenly distributed on 10 chromosomes. Phylogenetic analysis showed that the RcPRX family members were grouped into five clusters, most of which were closely related to Arabidopsis thaliana. Analysis of cis-acting elements in the promoters showed that RcPRX promoters contained the highest number of antioxidant responsive elements and abscisic acid responsive elements, and these genes may mediate oxidative and osmotic stress responses. In addition, transcriptome analysis showed that the high expression of RcPRX genes in castor bean roots may promote root growth and development and enhance plant adaptation to adverse stress. Meanwhile, qRT-PCR expression analysis revealed that most of the RcPRX genes were significantly up-regulated under salt stress, drought stress. A plausible explanation for the observed differential stress resilience among tissues with cotyledons exhibiting comparatively enhanced tolerance to salt and drought stress relative to roots and true leaves may reside in their distinct physiological and biochemical profiles.

conclusionsThese findings provide new insights into the composition, evolution, and function of the castor RcPRX gene family and provide a basis for subsequent exploration of gene function.

Indexed as

PeroxidasePeroxidasesPlant ProteinsRicinus communisStress, PhysiologicalGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyPeroxidasePeroxidasesPlant ProteinsAbiotic stressesBioinformaticsClass III peroxidaseRicinus communis

Identifiers

PMID40646456
PMCPMC12247346

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