Evidence map›Paper›PMID 40646011›Full record

ArticleScientific data2025

The chromosome-level genome assembly of Prunus cerasifera 'Atropurpurea'.

Hanlei Li, Linchang Dong, Mingjun Zhang, Jinrong Li, Yi Zheng, Qinghua Dong, Sen Wang

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hanlei LiBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.
Linchang DongBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.
Mingjun ZhangBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.
Jinrong LiBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China.
Yi ZhengBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China. yz@moilab.net.ORCID 0000-0002-8042-7770
Qinghua DongBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China. dongbac@126.com.
Sen WangBeijing Key Laboratory for Agriculture Application and New Technique, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China. wangsen10@mails.ucas.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prunus cerasifera 'Atropurpurea' (Purpleleaf Plum), known for its unique purple-red foliage, is an important ornamental plant that enhances the aesthetic value of urban greening. To explore the molecular mechanisms underlying leaf color changes, this study assembled the Purpleleaf Plum genome, providing new insights for related research. We used HiFi sequencing data to assemble its genome. After chromosome anchoring, the final genome size was 244.89 Mb, with a contig N50 of 26.60 Mb, and approximately 97.10% of sequences were anchored to 8 chromosomes. Genome annotation identified 28,231 protein-coding genes, with LTR transposons comprising 27.93% of the genome. BUSCO assessment revealed a genome completeness of 98.9%. Telomeric repeat analysis identified 14 telomeres, with six chromosomes capped by double telomeres and two chromosomes containing a single telomere. This high-quality Purpleleaf Plum genome provides a solid foundation for future gene function analysis, cultivar improvement, and genetic research, offering valuable resources for related fields.

Indexed as

Chromosomes, PlantGenome, PlantPrunusGenome SizeMolecular Sequence AnnotationTelomere

Identifiers

PMID40646011
PMCPMC12254290

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.