Evidence map›Paper›PMID 40645948›Full record

ArticleNature communications2025

Arctic Ocean virus communities and their seasonality, bipolarity, and prokaryotic associations.

Alyzza M Calayag, Taylor Priest, Ellen Oldenburg, Jan Muschiol, Ovidiu Popa, Matthias Wietz, David M Needham

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alyzza M CalayagGEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany.
Taylor PriestInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID http://orcid.org/0000-0003-4173-8354
Ellen OldenburgAlfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany.ORCID http://orcid.org/0000-0002-0993-9247
Jan MuschiolGEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany.ORCID http://orcid.org/0000-0002-2852-6747
Ovidiu PopaInstitute of Quantitative and Theoretical Biology, Heinrich Heine University, Düsseldorf, Germany.
Matthias WietzAlfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany.ORCID http://orcid.org/0000-0002-9786-3026
David M NeedhamGEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany. dneedham@geomar.de.ORCID http://orcid.org/0000-0001-7257-2516

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses of microbes play important roles in ocean environments as agents of mortality and genetic transfer, influencing ecology, evolution and biogeochemistry. However, we know little about the diversity, seasonality, and host interactions of viruses in polar waters. Here, we study dsDNA viruses in the Arctic Fram Strait across four years via 47 long-read metagenomes of the cellular size-fraction. Among 5662 vOTUs, 98% and 2% are Caudoviricetes and Megaviricetes, respectively. Viral coverage is, on average, 5-fold higher than cellular coverage, and 8-fold higher in summer. Viral community composition shows annual peaks in similarity and strongly correlates with prokaryotic community composition. Using network analysis, we identify putative virus-host interactions and six ecological modules associated with distinct environmental conditions. The network reveals putative novel cyanophages with time-lagged correlations to their hosts (in late summer) as well as diverse viruses correlated with Flavobacteriaceae, Pelagibacteraceae, and Nitrosopumilaceae. Via global metagenomes, we find that 42% of Fram Strait vOTUs peak in abundance in high latitude regions of both hemispheres, and encode proteins with biochemical signatures of cold adaptation. Our study reveals a rich diversity of polar viruses with pronounced seasonality, providing a foundation for understanding viral regulation and ecosystem impacts in changing polar oceans.

Indexed as

DNA VirusesSeawaterViromeArctic RegionsBacteriaBiodiversityHost Microbial InteractionsMetagenomeOceans and SeasSeasons

Identifiers

PMID40645948
PMCPMC12254263

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.