Evidence map›Paper›PMID 40644923›Full record

ArticleEuropean journal of medicinal chemistry2025

Design, synthesis, evaluation and X-ray structural studies of potent HIV-1 protease inhibitors containing substituted oxaspirocyclic carbamates as the P2 ligands.

Arun K Ghosh, Ryan Shaktah, Ajay K Ghosh, Megan E Johnson, Dipendra Bhandari, Masayuki Amano, Manabu Aoki, Andrey Kovalevsky, Hiroaki Mitsuya

Abstract read
In one paragraph

Article in European journal of medicinal chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Arun K GhoshDepartment of Chemistry, Purdue University, West Lafayette, IN, 47907, USA; Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, IN, 47907, USA. Electronic address: akghosh@purdue.edu.
Ryan ShaktahDepartment of Chemistry, Purdue University, West Lafayette, IN, 47907, USA.
Ajay K GhoshDepartment of Chemistry, Purdue University, West Lafayette, IN, 47907, USA.
Megan E JohnsonDepartment of Chemistry, Purdue University, West Lafayette, IN, 47907, USA.
Dipendra BhandariNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Masayuki AmanoDepartment of Infectious Diseases, Kumamoto University School of Medicine, Kumamoto, 860-8556, Japan.
Manabu AokiDepartment of Medical Technology, Kumamoto University School of Medicine, Kumamoto, 861-5598, Japan.
Andrey KovalevskyNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Hiroaki MitsuyaDepartment of Infectious Diseases, Kumamoto University School of Medicine, Kumamoto, 860-8556, Japan; Center for Clinical Sciences, National Center for Global Health and Medicine, Tokyo, 162-8655, Japan; Experimental Retrovirology Section, HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, 20892, USA.

Funding

Design & Synthesis of Nonpeptide Protease InhibitorsR01AI150466 · NIAID · PURDUE UNIVERSITY · PI ARUN K GHOSH · 2023 to 2026
$2.4M
Design & Synthesis of Nonpeptide Protease InhibitorsR37AI150466 · NIAID · PURDUE UNIVERSITY · PI GHOSH, ARUN K · 2019 to 2020
$969k
NIAID NIH HHS R01 AI150466NIAID NIH HHS R37 AI150466
6 · The paper itself

Abstract

We report here the design, synthesis and evaluation of a series of HIV-1 protease inhibitors that incorporate substituted oxaspirocyclic carbamate derivatives to serve as the P2 ligands. Various substituted ligand derivatives were synthesized in a racemic manner, using a tandem Prins/pinacol reaction as the key reaction. This reaction sets the relative stereochemistry of the oxaspirocyclic template in a highly diastereoselective manner. Reaction of the resulting ketone with enantiopure (S)-tert-butyl sulfinamide provided a convenient pathway to resolve the oxaspirocyclic ketone derivatives. The absolute stereochemical identity was determined by X-ray crystallography. The structure-activity studies demonstrate the effect of the stereochemistry of the oxaspirocyclic ring systems as well as the substitution effect on the aromatic ring. Several inhibitors exhibited potent HIV-1 protease inhibitory activity. One of these inhibitors displayed subnanomolar HIV-1 protease affinity and also exhibited potent antiviral activity. A high-resolution X-ray crystal structure of this inhibitor-bound HIV-1 protease show that the oxaspirocyclic P2 ligand forms an unconventional C-H⋯O bond with the backbone carboxyl group of Gly48' and an interesting N-H … π interaction with the aromatic ring in the S2 subsite of HIV-1 protease active site.

Indexed as

CarbamatesDrug DesignHIV-1HIV ProteaseHIV Protease InhibitorsSpiro CompoundsCrystallography, X-RayDose-Response Relationship, DrugHumansLigandsModels, MolecularMolecular StructureStructure-Activity RelationshipCarbamatesHIV ProteaseHIV Protease InhibitorsLigandsp16 protease, Human immunodeficiency virus 1Spiro CompoundsAntiviralBackbone bindingDarunavirHIV-1 proteaseInhibitorsOxaspirocyclicX-ray crystal structure

Identifiers

PMID40644923
PMCPMC12282846

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.