Evidence map›Paper›PMID 40643560›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2025

The Role of Human Papillomavirus E6 Oncoprotein as a Biomarker in Anal Cancer Screening in Persons Living with HIV.

Faiza Faria, Stephen E Hawes, John Lin, Jeffrey Schouten, Helen C Stankiewicz Karita, Stephen Cherne, Anjali Vasavada, Ruanne V Barnabas, Judith N Wasserheit, Qinghua Feng and 1 more

Abstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Faiza FariaInstitute for Public Health Genetics, University of Washington School of Public Health, Seattle, Washington.ORCID 0009-0001-2790-7900
Stephen E HawesDepartment of Epidemiology, University of Washington School of Public Health, Seattle, Washington.ORCID 0000-0002-3361-6026
John LinDepartment of Epidemiology, University of Washington School of Public Health, Seattle, Washington.ORCID 0000-0002-5602-7881
Jeffrey SchoutenDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, Washington.ORCID 0000-0001-5167-1769
Helen C Stankiewicz KaritaDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, Washington.ORCID 0000-0002-9458-286X
Stephen CherneDepartment of Pathology, University of Washington, Seattle, Washington.ORCID 0009-0009-8801-3773
Anjali VasavadaDepartment of Epidemiology, University of Washington School of Public Health, Seattle, Washington.ORCID 0000-0002-6832-8139
Ruanne V BarnabasDivision of Infectious Diseases, Massachusetts General Hospital, Harvard Medical School, Boston, Washington.ORCID 0000-0002-1793-6003
Judith N WasserheitDepartment of Epidemiology, University of Washington School of Public Health, Seattle, Washington.ORCID 0000-0003-0408-446X
Qinghua FengFidaLab, Seattle, Washington.ORCID 0009-0003-7265-2091
Rachel L WinerDepartment of Epidemiology, University of Washington School of Public Health, Seattle, Washington.ORCID 0000-0002-8119-5107

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI CONNIE L CELUM · 1988 to 2026
$104.9M
National Institute of Allergy and Infectious Diseases (NIAID) P30AI027757NIAID NIH HHS P30 AI027757
6 · The paper itself

Abstract

backgroundMolecular biomarkers could enhance anal cancer screening accuracy in people living with human immunodeficiency virus. We assessed the performance of human papillomavirus (HPV) 16/18 E6 oncoprotein in detecting anal high-grade squamous intraepithelial lesions (HSIL) in men living with human immunodeficiency virus.

methodsWe analyzed clinical data from 125 clinic visits of 82 men living with human immunodeficiency virus who underwent high-resolution anoscopy in Seattle, Washington (2015-2016), including the presence and extent of HSIL. Anal brush specimens were tested for high-risk HPV DNA, with HPV-16/18-positive samples further tested for E6 oncoprotein. Sensitivity, specificity, positive predictive value, and negative predictive value of HPV-16/18 E6 oncoprotein for HSIL were calculated, along with prevalence ratios with 95% confidence intervals.

resultsForty-eight (38.4%) samples were HPV-16/18 positive, including three E6 positive. Forty-nine (39.2%) samples had corresponding HSIL. Specificity and positive predictive value of HPV-16/18 E6 for HSIL was 100%, and the prevalence ratio was 7.33 (95% confidence interval, 2.44-22.07) for HPV-16/18 E6-positive versus high-risk HPV-negative samples. Sensitivity for HSIL, however, was only 6.1%, with a moderate negative predictive value (62.3%). Two of four persons with HSILs with >75% disease extent had corresponding HPV-16/18 E6-positive samples, whereas none of 30 persons with <25% extent did.

conclusionsThe HPV-16/18 E6 oncoprotein has potential utility as a triage biomarker for identifying and prioritizing lesions at the highest risk for progression. IMPACT: People living with human immunodeficiency virus are at an increased risk of anal cancer and would benefit from improved screening methods. Further research may elucidate the role of HPV-16/18 E6 oncoprotein in anal cancer prevention, alone or combined with other biomarkers.

Indexed as

Anus NeoplasmsBiomarkers, TumorDNA-Binding ProteinsEarly Detection of CancerHIV InfectionsOncogene Proteins, ViralPapillomavirus InfectionsRepressor ProteinsSquamous Intraepithelial LesionsAdultAgedHuman papillomavirus 16Human papillomavirus 18Human Papillomavirus VirusesHumansMaleBiomarkers, TumorDNA-Binding ProteinsE6 protein, Human papillomavirus type 16E6 protein, Human papillomavirus type 18Oncogene Proteins, ViralRepressor Proteins

Identifiers

PMID40643560
PMCPMC12360268

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.