Evidence map›Paper›PMID 40643079›Full record

ArticleFEBS open bio2025

Two-way inhibition of PAX5 transcriptional activity by PAX5::CBFA2T3.

Reina Ueno, Aki Terasaki, Yuiko Imai, Yuri Kimura, Yuna Kojima, Misa Irie, Koya Odaira, Mina Noura, Shuichi Okamoto, Takahiko Yasuda and 3 more

Abstract read
In one paragraph

Article in FEBS open bio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Reina UenoDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Aki TerasakiDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Yuiko ImaiDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Yuri KimuraDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Yuna KojimaDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Misa IrieDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Koya OdairaDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Mina NouraDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Shuichi OkamotoDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.
Takahiko YasudaClinical Research Center, National Hospital Organization Nagoya Medical Center, Japan.
Shinobu TsuzukiDepartment of Biochemistry, Aichi Medical University School of Medicine, Nagakute, Japan.
Hitoshi KiyoiDepartment of Hematology and Oncology, Nagoya University Graduate School of Medicine, Japan.
Fumihiko HayakawaDivision of Cellular and Genetic Sciences, Department of Integrated Health Sciences, Nagoya University Graduate School of Medicine, Japan.ORCID https://orcid.org/0000-0002-6067-6382

Funding

Japan Agency for Medical Research and Development JP22ck0106607Japan Agency for Medical Research and Development JP23ck0106851Japan Society for the Promotion of Science 21 K19505Japan Society for the Promotion of Science 22H03102
6 · The paper itself

Abstract

PAX5 promotes B-cell differentiation by transcriptional activation of B-lineage-specific genes. Chromosomal rearrangements in PAX5 account for 2-3% of B-ALL cases, and most lead to the expression of in-frame fusion transcripts. These fusions can encode chimeric proteins composed of the N-terminal portion of PAX5 and the C-terminal region of a variety of heterogeneous fusion partners. We analyzed the function of PAX5::CBFA2T3 (PAX5-C), a fusion protein found in B-cell acute lymphoblastic leukemia. PAX5-C strongly repressed PAX5 transcriptional activity in luciferase assays. In co-immunoprecipitation assays, PAX5-C bound to PAX5 and HDAC1/3. However, neither HDAC knockdown nor treatment with a HDAC inhibitor showed any effect on the repression of PAX5 transactivity by PAX5-C. In addition, PAX5-C with DNA binding-defective mutations (PAX5 M-C) could still repress PAX5 transactivity; however, the repression of PAX5 transactivity by PAX5 M-C was abolished by inhibition or knockdown of HDAC. These findings indicate that PAX5-C exhibits two mechanisms of repression: a DNA binding-dependent and a HDAC-dependent mechanism, with either being sufficient for the repression of PAX5 transactivity by PAX5-C. We performed ChIP-qPCR under conditions of the luciferase assay and inferred that these two mechanisms involved the inhibition of direct binding of PAX5 to the promoter due to promoter occupancy by PAX5-C, and recruitment of HDAC1/3 to the PAX5 transcription complex by the binding of PAX5-C to PAX5 on the promoter. The present results provide novel insight into the mechanisms of how PAX5-fusion proteins inhibit PAX5 function.

Indexed as

Oncogene Proteins, FusionPAX5 Transcription FactorHistone Deacetylase 1Histone DeacetylasesHumansTranscriptional ActivationTranscription, GeneticHistone Deacetylase 1Histone DeacetylasesOncogene Proteins, FusionPAX5 protein, humanPAX5 Transcription Factoracute lymphoblastic leukemiafusion genehistone deacetylasePAX5

Identifiers

PMID40643079
PMCPMC12582980

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.