Evidence map›Paper›PMID 40640882›Full record

ArticleJournal of translational medicine2025

Temporal dynamics of the multi-omic response reveals the modulation of macrophage subsets post-myocardial infarction.

Yuan Wu, Panting Wei, Bin Li, Jiaqi He, Ting Zhou, Qingbin Hou, Yunhao Yu, Jingjin Hou, Chenghui Yan, Yaling Han

Abstract read
In one paragraph

Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yuan Wu *Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Panting Wei *State Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Bin LiDepartment of Cardiology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Jiaqi HeState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Ting ZhouState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Qingbin HouState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Yunhao YuState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Jingjin HouState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China.
Chenghui YanState Key Laboratory of Frigid Zone Cardiovascular Disease, Department of Cardiology, General Hospital of Northern Theater Command, Cardiovascular Research Institute, Shenyang, 110016, China. yanch1029@163.com.
Yaling HanDepartment of Cardiology, Renmin Hospital of Wuhan University, Wuhan, 430060, China. hanyaling@163.net.ORCID 0000-0003-4569-6737

Funding

China National Key R&D Project Key 2022YFC2503403Joint Project of Liaoning Province Science and Technology Plan 2024JH2/102600279Key Research and Development Program of Liaoning Province 2024JH2/102500031National Natural Science Foundation of China 82270300National Natural Science Foundation of China 82400352National Natural Science Foundation of China 82470303
6 · The paper itself

Abstract

aimsMacrophage-mediated inflammatory response plays a pivotal role in the pathological process of myocardial infarction (MI). Although single-cell RNA sequencing (scRNA-seq) shed light on the differentiation and function of macrophage subsets post-MI, it failed to capture protein-level changes, limiting comprehensive assessment.

methodsTo address this limitation, first, we analyzed the scRNA-seq data from ArrayExpress, after comprehensive quality control, normalization, dimensionality reduction, and clustering analyses, macrophage subsets were systematically classified and annotated using established computational pipelines. Then, these computational classifications were validated through rigorous animal experiments. Finally, we integrated proteomic data from our experimental model and scRNA-seq to analyze the effect of protein modification changes in macrophage subsets on prognosis post-MI.

resultsA total of seven macrophage clusters were identified and annotated, including Spp1

conclusionBy integrating scRNAseq and proteomics data, this study provides a comprehensive overview of heterogeneity and dynamic protein level changes of macrophages post-MI, and characterizes the PTMs in macrophages, and lays the groundwork for developing targeted interventions tailored to specific cell types and time points post-MI.

Indexed as

MacrophagesMyocardial InfarctionProteomicsAnimalsCluster AnalysisMaleMiceMice, Inbred C57BLMultiomicsReproducibility of ResultsSingle-Cell AnalysisTime FactorsComparative analysisMyocardial infractionPost-translational modificationsProteomicsTranscriptomics

Identifiers

PMID40640882
PMCPMC12247204

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.