Evidence map›Paper›PMID 40637512›Full record

ArticleInvestigative ophthalmology & visual science2025

FOXP4 Variants Are Associated With Plateau Iris and Angle Closure Glaucoma.

William Presley, Su Qing Wang, Bin Guan, Seong Hoon Jeong, Chelsea Bender, Erika Ward, Kayla Johnson, Bridget Blevins, Natalie Michaels, Manjool Shah and 4 more

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

William PresleyDepartment of Human Genetics, University of Michigan, Ann Arbor, Michigan, United States.
Su Qing WangDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Bin GuanOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States.
Seong Hoon JeongDepartment of Human Genetics, University of Michigan, Ann Arbor, Michigan, United States.
Chelsea BenderOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States.
Erika WardDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Kayla JohnsonDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Bridget BlevinsDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Natalie MichaelsDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Manjool ShahDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Sayoko E MoroiDepartment of Ophthalmology and Visual Sciences, The Ohio State University School of Medicine, Columbus, Ohio, United States.
Robert B HufnagelOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, Maryland, United States.
Julia E RichardsDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, United States.
Lev PrasovDepartment of Human Genetics, University of Michigan, Ann Arbor, Michigan, United States.

Funding

VIVARIUM MODULEP30EY007003 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti · 1987 to 2026
$17.6M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
Michigan Vision Clinician Scientist Development ProgramK12EY022299 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Abigail Fahim, DAVID N ZACKS · 2013 to 2026
$6.3M
Defining the genetic landscape of nanophthalmos and the role of MYRFK08EY032098 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PRASOV, LEV · 2021 to 2025
$1.2M
Validating novel candidate genes for normal-tension glaucomaF31EY035557 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PRESLEY, WILLIAM THOMAS · 2023 to 2024
$83k
NEI NIH HHS F31 EY035557NEI NIH HHS K08 EY032098NEI NIH HHS K12 EY022299NEI NIH HHS P30 EY007003NIGMS NIH HHS T32 GM007544
6 · The paper itself

Abstract

Purpose: Angle closure glaucoma (ACG) is a common cause of adult-onset vision loss that often presents with iris abnormalities and short axial lengths. Although it is heritable, little is known about the genetic risk factors underlying this condition. We thus conducted a disease gene discovery study in a family exhibiting an autosomal dominant triad of ACG, plateau iris, and short axial lengths. Methods: Pooled exome sequencing was performed to identify coding variants contributing to disease. The spatiotemporal expression pattern of candidate gene FOXP4 was evaluated via immunostaining in embryonic mouse eyes. YFP-tagged mutant and wild-type FOXP4 proteins were expressed in HEK-293T and ARPE-19 cells to evaluate nuclear localization, and an SRPX2-Luciferase reporter was used to ascertain variant effects on transcriptional regulation. We also reviewed more than 20,000 patients (primarily from the UK Biobank) diagnosed with glaucoma and/or disorders of the iris and ciliary body for additional FOXP4 variants and functionally validated them as described. Results: We identified a single likely pathogenic variant in transcription factor FOXP4: c.1433A>G (p.Q478R). FOXP4 is highly expressed in multiple structures relevant to the drainage angle, such as the periocular mesenchyme, iris, ciliary body, and cornea. The p.Q478R variant appears to be a hypomorphic allele that retains its transcriptional activity, but often mislocalizes to cytosolic aggregates. Comparable variants, including one found in another glaucoma patient, show similar mislocalization that may indicate protein instability. Conclusions: These data suggest that FOXP4 is important for anterior segment development and that variants therein are rare risk factors for ACG.

Indexed as

Forkhead Transcription FactorsGlaucoma, Angle-ClosureIrisIris DiseasesMutationAdultAnimalsExome SequencingFemaleHEK293 CellsHumansIntraocular PressureMaleMiceMiddle AgedPedigreeForkhead Transcription Factors

Identifiers

PMID40637512
PMCPMC12255186

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.