Evidence map›Paper›PMID 40636753›Full record

ArticleDiabetes, metabolic syndrome and obesity : targets and therapy2025

Identification of Shared Biomarkers in Chronic Kidney Disease and Diabetic Nephropathy Using Single-Cell Sequencing.

Jin-Sha Ma, Jiao Yang, Wen-Chao Wang, Yi-Xiao Quan, Xing-Na Liao, Yi-Hua Bai, Hong-Ying Jiang

Abstract read
In one paragraph

Article in Diabetes, metabolic syndrome and obesity : targets and therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Jin-Sha MaDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Jiao YangDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Wen-Chao WangDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Yi-Xiao QuanDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Xing-Na LiaoDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Yi-Hua BaiDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.
Hong-Ying JiangDepartment of Nephrology, The Second Hospital Affiliated to Kunming Medical University, Kunming, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Chronic kidney disease (CKD) and diabetic nephropathy (DN) represent significant renal health challenges, with overlapping pathogenic mechanisms. This study evaluated shared biomarkers in CKD and DN through single-cell sequencing, aiming to identify potential diagnostic and therapeutic targets and provide new insights into their common pathogenesis. Methods: In this study, single-cell RNA sequencing was performed on nine columns of human blood samples, including three control cases, three CKD cases, and three DN cases. Following sequencing, single-cell analysis was conducted to identify different cell types. Differential expression analysis was then performed to compare the disease samples (CKD and DN) with control samples, resulting in the identification of differentially expressed genes (DEGs). The intersection of DEGs between the disease samples and the control samples was extracted, and a Protein-Protein Interaction (PPI) network was constructed using these intersecting genes, with biomarkers identified through the STRING database. Additionally, Gene Set Enrichment Analysis and GeneMANIA were applied to explore the potential mechanisms underlying these biomarkers. Results: Findings revealed elevated IRF7 expression within dendritic cells (DC), while MX1 showed specifically elevated expression in both DN and CKD samples. MX1 and IRF7 exhibited notable high expression in DC. Four biomarkers were all enriched in the Oxidative Phosphorylation pathway in CKD, and in DN, they were all enriched in the FcγR Mediated Phagocytosis pathway. STAT1 and ISG15 were widely expressed across macrophages, monocytes, NK cells, and NK T cells. In conclusion, the four biomarkers were expressed differently in the disease and control groups of different immune cells. Conclusion: Our study successfully identified MX1, IRF7, STAT1, and ISG15 as shared biomarkers in CKD and DN, revealing their distinct expression patterns and potential roles in disease mechanisms.

Indexed as

chronic kidney diseasediabetic nephropathygene set enrichment analysispseudotimesingle-cell RNA-sequencing

Identifiers

PMID40636753
PMCPMC12239898

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.