Evidence map›Paper›PMID 40635484›Full record

ArticleThe Korean journal of internal medicine2025

Distinct microbial signatures of liquid biopsy samples during gastric carcinogenesis and insights from extracellular vesicle analysis.

Hee Sang You, Jae Yong Park, Hochan Seo, Beom Jin Kim, Jae Gyu Kim

Abstract read
In one paragraph

Article in The Korean journal of internal medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hee Sang YouDepartment of Internal Medicine, Chung-Ang University College of Medicine, Seoul, Korea.
Jae Yong ParkDepartment of Internal Medicine, Chung-Ang University College of Medicine, Seoul, Korea.
Hochan SeoDepartment of Internal Medicine, Chung-Ang University College of Medicine, Seoul, Korea.
Beom Jin KimDepartment of Internal Medicine, Chung-Ang University College of Medicine, Seoul, Korea.
Jae Gyu KimDepartment of Internal Medicine, Chung-Ang University College of Medicine, Seoul, Korea.

Funding

Chung-Ang UniversityMinistry of Science and ICTNational Research Foundation of Korea 2022R1F1A1069321
6 · The paper itself

Abstract

BACKGROUND/

aimsThe early detection of gastric cancer is crucial for improving patient outcomes. However, its pathogenesis is not fully understood. The microbiome and extracellular vesicles (EVs) might play a role in gastric carcinogenesis. We aimed to identify gastric-carcinogenesis-associated microbial signatures and evaluate whether these features vary across disease stages.

methodsWe enrolled 141 participants (132 patients with gastric cancer or dysplasia and 9 healthy controls). Microbial-derived EVs were isolated from gastric juice, saliva, serum, and urine. Next-generation sequencing of EV-derived bacterial DNA was performed.

resultsThis sequencing revealed the alpha and beta diversities and microbial composition across different disease stages. The alpha diversity was significantly increased in the gastric juice and serum of disease groups. The beta diversity showed significant differences among patient groups. Distinct microbial signatures were observed across different disease stages in all four sample types. Specific bacterial species--Cutibacterium acnes, Streptococcus oralis, Pseudomonas antarctica, Ralstonia insidiosa, and Pseudomonas yamanorum--exhibited unique abundance patterns associated with disease progression, suggesting their potential as noninvasive biomarkers.

conclusionChanges in microbial diversity and distinct microbial signatures were observed during gastric carcinogenesis in both gastric juice and extragastric samples, indicating the potential of microbial-derived EVs from liquid biopsy samples as biomarkers for gastric cancer.

Indexed as

BacteriaBiomarkers, TumorExtracellular VesiclesGastrointestinal MicrobiomeStomach NeoplasmsAdultAgedCase-Control StudiesDNA, BacterialFemaleGastric JuiceHumansLiquid BiopsyMaleMiddle AgedSalivaBiomarkers, TumorDNA, BacterialBiomarkersExtracellular vesiclesLiquid biopsyMicrobiomeStomach neoplasms

Identifiers

PMID40635484
PMCPMC12257012

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.