Evidence map›Paper›PMID 40634958›Full record

ArticleCell communication and signaling : CCS2025

In vivo CRISPR screening identifies POU3F3 as a novel regulator of ferroptosis resistance in hepatocellular carcinoma via retinoic acid signaling.

Yu Tian, Xin Bao, Shan Lei, Youcai Huang, Xiaoling Wang, Yanyang Tu, Qinglian He, Feixiang Zhang, Haicheng Xu, Milad Ashrafizadeh and 3 more

Abstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yu Tian *1Science Research Center,the Huizhou Central People's Hospital, Guangdong Medical University, Huizhou, Guangdong, China.
Xin Bao *Engineering Research Center of Chronic Disease Diagnosis and Treatment, School of Basic Medicine, Guizhou Medical University, No. 9 Beijing Road, Guiyang, Guizhou, 550009, China.
Shan Lei *Engineering Research Center of Chronic Disease Diagnosis and Treatment, School of Basic Medicine, Guizhou Medical University, No. 9 Beijing Road, Guiyang, Guizhou, 550009, China.
Youcai Huang1Science Research Center,the Huizhou Central People's Hospital, Guangdong Medical University, Huizhou, Guangdong, China.
Xiaoling Wang1Science Research Center,the Huizhou Central People's Hospital, Guangdong Medical University, Huizhou, Guangdong, China.
Yanyang Tu1Science Research Center,the Huizhou Central People's Hospital, Guangdong Medical University, Huizhou, Guangdong, China.
Qinglian HeDepartment of Pathology, the Huizhou Central People's Hospital, Guangdong Medical University, No.41 E Ling North Road, Huizhou, Guangdong, China.
Feixiang ZhangDepartment of Pathology, the Huizhou Central People's Hospital, Guangdong Medical University, No.41 E Ling North Road, Huizhou, Guangdong, China.
Haicheng XuDepartment of Pathology, the Huizhou Central People's Hospital, Guangdong Medical University, No.41 E Ling North Road, Huizhou, Guangdong, China.
Milad AshrafizadehDepartment of Radiation Oncology, Shandong Provincial Key Laboratory of Radiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University, Shandong Academy of Medical Sciences, Jinan, 250117, Shandong, China.
Gautam SethiDepartment of Pharmacology and NUS Centre for Cancer Research, Yong Loo Lin School of Medicine, National University of Singapore 16 Medical Drive, Singapore, 117600, Singapore. phcgs@nus.edu.sg.
Furong WangDepartment of Pathology, the Huizhou Central People's Hospital, Guangdong Medical University, No.41 E Ling North Road, Huizhou, Guangdong, China. ldyy_wangfr@lzu.edu.com.
Zhirui ZengEngineering Research Center of Chronic Disease Diagnosis and Treatment, School of Basic Medicine, Guizhou Medical University, No. 9 Beijing Road, Guiyang, Guizhou, 550009, China. zengzhirui@gmc.edu.cn.

Funding

National Natural Science Foundation of China 32260169National Natural Science Foundation of China 82303903the Affiliated Hospital of Guizhou Medical University Postdoctoral fellow Start-up fund BSH-Q-2023-06
6 · The paper itself

Abstract

backgroundSorafenib, a ferroptosis agonist, is a first-line treatment for advanced hepatocellular carcinoma (HCC). However, its clinical efficacy is limited due to drug resistance, resulting in modest improvements in patient survival. Hence, the present study has been designed to identify critical molecular targets associated with sorafenib resistance and investigate the potential inhibitors in overcoming this therapeutic challenge.

methodsIn vivo whole-genome CRISPR/Cas9 library screens were conducted to identify resistance factors to ferroptosis agonists, such as RSL3 and sorafenib, in HCC. The effects and underlying molecular mechanisms of these resistance factors were investigated in HCC cells using ferroptosis detection assays, xenograft tumor models, chromatin immunoprecipitation (ChIP), and dual-luciferase reporter assays. Potential inhibitors targeting these factors were evaluated through computer-aided virtual screening, molecular dynamics simulations, surface plasmon resonance analysis, and functional evaluations.

resultsA retinoic acid metabolism gene cluster, including ADH4, ALDH1A1, ALDH1A3, FABP5, RBP1, and RDH10, was found demonstrating upregulation in HCC cells treated with ferroptosis agonist, sorafenib. This gene cluster contributes to the ferroptosis resistance by producing the strong reducing agent retinoic acid. The transcription factor POU3F3 was identified as a key regulator for the retinoic acid metabolism gene cluster, which simultaneously binds to their promoters, increasing their transcription and promoting retinoic acid production. Knockdown of POU3F3 significantly enhanced the pro-ferroptotic and inhibitory effects of sorafenib on HCC cells by suppressing retinoic acid metabolism. Furthermore, rosarin was identified as a POU3F3 inhibitor, with an equilibrium dissociation constant of 7.57 µM, and demonstrated a synergistic effect with sorafenib against HCC cells both in vitro and in vivo.

conclusionsAccording to the results, POU3F3 acts as a protective regulator against sorafenib-induced ferroptosis in HCC cells by enhancing the transcription of multiple retinoic acid metabolism genes and promoting retinoic acid production. The POU3F3 inhibitor, rosarin, shows potential as an ideal candidate for overcoming sorafenib resistance in HCC.

Indexed as

Carcinoma, HepatocellularCRISPR-Cas SystemsDrug Resistance, NeoplasmFerroptosisLiver NeoplasmsOctamer Transcription Factor-3Signal TransductionTretinoinAnimalsCell Line, TumorHumansMiceMice, NudeSorafenibOctamer Transcription Factor-3SorafenibTretinoinCRISPR library screeningHepatocellular carcinomaPOU3F3Retinoic acid metabolismSorafenib

Identifiers

PMID40634958
PMCPMC12243207

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.