Evidence map›Paper›PMID 40633126›Full record

ReviewCurrent opinion in structural biology2025

A practical look at cryo-electron tomography image processing: Key considerations for new biological discoveries.

William Wan

Abstract readReview
In one paragraph

Review in Current opinion in structural biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

William WanDepartment of Biochemistry and Center for Structural Biology, Vanderbilt University, 465 21st Ave S, MRB III Bio/Sci 5140, Nashville, TN 37232, USA. Electronic address: william.wan@vanderbilt.edu.

Funding

Elucidating the mechanisms of viral life cycles under near-native conditionsDP2GM146321 · NIGMS · VANDERBILT UNIVERSITY · PI WAN, WILLIAM N · 2021 to 2024
$2.4M
NIGMS NIH HHS DP2 GM146321
6 · The paper itself

Abstract

Cryo-electron tomography (cryo-ET) enables 3D visualization of complex biological environments without the need for purification, thereby preserving the native biological context of the specimen. For determining macromolecular structures, repeating molecules can be localized in tomograms and subjected to subtomogram averaging, the 3D analog to single particle analysis. In addition to molecular structure, tomograms have a wealth of other information that can be accessed through image processing, including the analysis of membrane surfaces, cytoskeletal filaments, and the relationships between molecules of interest. Here, we provide an overview of recent developments in cryo-ET image processing with the goal of clarifying key considerations to help new users obtain novel biological findings.

Indexed as

Cryoelectron MicroscopyElectron Microscope TomographyImage Processing, Computer-AssistedAnimalsHumansImaging, Three-Dimensional

Identifiers

PMID40633126
PMCPMC13200697

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.