Evidence map›Paper›PMID 40632811›Full record

ArticlePLoS pathogens2025

HIV-1 Vpr orchestrates ciTRAN upregulation through TGF-β induction.

Aditi Choudhary, Katyayani Mallick, Rishikesh Dalavi, Ajit Chande

Abstract read
In one paragraph

Article in PLoS pathogens, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Aditi ChoudharyMolecular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, India.
Katyayani MallickMolecular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, India.
Rishikesh DalaviMolecular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, India.
Ajit ChandeMolecular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, India.ORCID 0000-0003-2210-5180

Funding

Wellcome Trust
6 · The paper itself

Abstract

Circular RNA (circRNA) expression is widespread in immune cells infected by HIV-1, but the crosstalk between circRNA expression and various cellular signaling pathways remains elusive. Here, we report that HIV-1 Vpr can induce the production of TGF-β during infection, which we linked to the upregulation of ciTRAN, a proviral circRNA encoded by SMARCA5. Consistent with this finding, we observed that the essential intracellular TGF-β receptor signaling component SMAD2/3 was recruited to the SMARCA5 promoter in a Vpr-dependent manner. SMARCA5 promoter analysis and functional assays further revealed that SAMD2/3 binding motif in the SMARCA5 promoter is crucial for ciTRAN upregulation. Notably, in response to treatment with DNA-damaging agents or the exogenous addition of recombinant TGF-β, the TGF-SMAD axis upregulated the expression of ciTRAN as well as the parental SMARCA5 mRNA. Regardless, the QKI protein was necessary for ciTRAN biogenesis. Finally, pharmacological targeting or genetic ablation of TGFBR1 can reduce the ability of Vpr to promote the expression of ciTRAN and viral genes. These results highlight the TGF-β-mediated regulation of ciTRAN expression which may play a role in modulating HIV-1 replication.

Indexed as

HIV-1HIV InfectionsIntracellular Signaling Peptides and ProteinsTransforming Growth Factor betavpr Gene Products, Human Immunodeficiency VirusHumansRNA, CircularSignal TransductionUp-RegulationIntracellular Signaling Peptides and ProteinsRNA, CircularTransforming Growth Factor betavpr Gene Products, Human Immunodeficiency Virusvpr protein, Human immunodeficiency virus 1

Identifiers

PMID40632811
PMCPMC12266428

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.