Evidence map›Paper›PMID 40632351›Full record

ReviewPlant molecular biology2025

Emerging trends in transgene-free crop development: insights into genome editing and its regulatory overview.

Vadthya Lokya, Surender Singh, Roni Chaudhary, Alka Jangra, Siddharth Tiwari

Abstract readReview
PubMed Publisher
In one paragraph

Review in Plant molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Harnessing artificial intelligence in plant breeding: innovations in digital phenotyping and breeding methodologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Biodiversity and genetic improvement ofFrontiers in plant science · 2026
    Review
  8. Article
  9. Article
  10. Genome Editing by Grafting.International journal of molecular sciences · 2025
    Review
  11. Efficient CRISPR/Frontiers in plant science · 2025
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Vadthya LokyaPlant Tissue Culture and Genetic Engineering Lab, BRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) (Formerly National Agri-Food Biotechnology Institute), Department of Biotechnology, Ministry of Science and Technology (Government of India), Sector-81, S.A.S. Nagar, Mohali, Punjab, 140306, India.
Surender SinghPlant Tissue Culture and Genetic Engineering Lab, BRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) (Formerly National Agri-Food Biotechnology Institute), Department of Biotechnology, Ministry of Science and Technology (Government of India), Sector-81, S.A.S. Nagar, Mohali, Punjab, 140306, India.
Roni ChaudharyPlant Tissue Culture and Genetic Engineering Lab, BRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) (Formerly National Agri-Food Biotechnology Institute), Department of Biotechnology, Ministry of Science and Technology (Government of India), Sector-81, S.A.S. Nagar, Mohali, Punjab, 140306, India.
Alka JangraPlant Tissue Culture and Genetic Engineering Lab, BRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) (Formerly National Agri-Food Biotechnology Institute), Department of Biotechnology, Ministry of Science and Technology (Government of India), Sector-81, S.A.S. Nagar, Mohali, Punjab, 140306, India.
Siddharth TiwariPlant Tissue Culture and Genetic Engineering Lab, BRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) (Formerly National Agri-Food Biotechnology Institute), Department of Biotechnology, Ministry of Science and Technology (Government of India), Sector-81, S.A.S. Nagar, Mohali, Punjab, 140306, India. siddharth@nabi.res.in.ORCID http://orcid.org/0000-0003-3958-8465

Funding

Biotechnology Industry Research Assistance Council BIRAC/TechTransfer/08/I2/QUT-BBFBRIC-National Agri-Food and Biomanufacturing Institute (BRIC-NABI) Core research grant
6 · The paper itself

Abstract

Genome editing tools have revolutionized plant biology research offering unparalleled applications for genome manipulation and trait improvement in crops. Adopting such advanced biotechnological tools is inevitable to meet increasing global food demand and address challenges in food production, including (a)biotic stresses and inadequate nutritional value. Despite reliance on conventional genetic manipulation methods, the CRISPR-Cas-mediated genome editing toolbox allows precise modification of DNA/RNA in a target organism's genome. So far, CRISPR-Cas has been widely used to enhance yield, quality, stress tolerance, and nutritional value in various food crops. However, challenges such as reagent delivery in suitable explants, precise editing with minimal off-target effect, and generating transgene-free plants persist as major bottlenecks in most plant species. Components of CRISPR-Cas construct mainly Cas, guide RNA (gRNA), and selectable marker genes are often integrated into the host genome, which raises regulatory concerns. However, adapting advanced gene-editing strategies, including high-efficiency Cas endonucleases, DNA-independent RNP delivery, morphogenetic regulators, and grafting-mediated editing, are paving the way for transgene-free crop improvement while easing biosafety regulations. Further, regulatory frameworks for genome-edited crops vary globally, with several countries accepting them and others debating their legal status. Hence, the disparity in global regulatory guidelines of genome editing curbs commercialization. The current review highlights the emerging CRISPR-mediated tools or methods and their applications in developing transgene-free designer crops to harness the benefits of advanced genome manipulation.

Indexed as

Crops, AgriculturalGene EditingGenome, PlantCRISPR-Cas SystemsPlants, Genetically ModifiedTransgenesCRISPR–CasGenome editing regulationsRibonucleoprotein complexTransgene-free genome editingVirus-mediated delivery

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.