Evidence map›Paper›PMID 40631899›Full record

ArticlemSystems2025

Genomic and functional characterization of a

Ni Zhao, Peiling Geng, Alejandro Gaher Perez, Anakha Chandramana Maya, Brijesh Yadav, Yuxuan Du, Yong Ge

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The Gut Microbiota Regulates Motor Deficits via Butyrate in a GnalAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ni Zhao *Department of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.
Peiling Geng *Department of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.
Alejandro Gaher PerezDepartment of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.
Anakha Chandramana MayaDepartment of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.
Brijesh YadavDepartment of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.
Yuxuan DuDepartment of Electrical and Computer Engineering, University of Texas at San Antonio, San Antonio, Texas, USA.
Yong GeDepartment of Microbiology, Immunology & Molecular Genetics, University of Texas Health San Antonio, San Antonio, Texas, USA.ORCID 0000-0001-5967-3857

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
FACSAria Fusion cell sorter for Flow Cytometry Shared ResourceS10OD030432 · OD · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BERTON, MICHAEL T · 2022 to 2022
$596k
NCI NIH HHS P30 CA054174NIH HHS S10 OD030432
6 · The paper itself

Abstract

The gut is the most complex microbial ecosystem in the body that greatly influences human immune and metabolic health. However, the functional understanding of gut microbiome is hampered by our limited ability to obtain bacterial cultures for experimental validation, particularly low-abundant species that may carry specific functions but are often overlooked by population-based analyses. Here, we isolated and characterized a novel strain of

Indexed as

ClostridiaceaeEubacterialesGastrointestinal MicrobiomeGenome, BacterialAnimalsColonDendritic CellsGenomicsHumansMaleMiceMice, Inbred C57BLPhylogenyButyricicoccus porcorumcholesterol biosynthesiscolonic epithelial cellgut microbiomeT helper 17 cell

Identifiers

PMID40631899
PMCPMC12363227

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.