Evidence map›Paper›PMID 40630577›Full record

ArticlemedRxiv : the preprint server for health sciences2025

A Pan-Organ Vision-Language Model for Generalizable 3D CT Representations.

Cameron Beeche, Joonghyun Kim, Hamed Tavolinejad, Bingxin Zhao, Rakesh Sharma, Jeffrey Duda, James Gee, Farouk Dako, Anurag Verma, Colleen Morse and 13 more

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Cameron BeecheDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID 0000-0002-5781-8810
Joonghyun KimDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Hamed TavolinejadDivision of Cardiovascular Medicine, Hospital of the University of Pennsylvania, Philadelphia, PA, 19104, USA.
Bingxin ZhaoDepartment of Statistics and Data Science, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Rakesh SharmaDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Jeffrey DudaDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
James GeeDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Farouk DakoDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Anurag VermaDepartment of Medicine, Division of Translational Medicine and Human Genetics, University of Pennsylvania, Philadelphia, PA 19104, USA.
Colleen MorseDepartment of Medicine, Division of Translational Medicine and Human Genetics, University of Pennsylvania, Philadelphia, PA 19104, USA.
Bojian HouDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Li ShenDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0002-5443-0503
Hersh SagreiyaDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Christos DavatzikosAI2D Center for AI and Data Science, University of Pennsylvania, Philadelphia, USA.
Scott DamrauerDepartment of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0001-8009-1632
Marylyn D RitchieDepartment of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Daniel RaderDepartment of Medicine, Division of Translational Medicine and Human Genetics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-9245-9876
Qi LongDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Tianlong ChenDepartment of Computer Science, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Charles E KahnDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Julio ChirinosDivision of Cardiovascular Medicine, Hospital of the University of Pennsylvania, Philadelphia, PA, 19104, USA.
Walter R WitscheyDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID 0000-0003-1669-2120
Penn Medicine Biobank

Funding

Phenotypic Diversity in COVID-19UL1TR001878 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2016 to 2025
$102.4M
Subclinical Vascular Contributions to Alzheimer's Disease: The Multi-Ethnic Study of Atherosclerosis (MESA) Multisite Study of AD (Renewal)R01AG058969 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Timothy M. Hughes, YONGMEI LIU · 2018 to 2026
$33.4M
Understanding the relationship between obesity and tongue fat in humans and ratsP01HL094307 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI PACK, ALLAN I · 2009 to 2020
$23.7M
Technology Identification and Training CoreP30AG073105 · NIA · UNIVERSITY OF PENNSYLVANIA · PI DEMIRIS, GEORGE, KARLAWISH, JASON H · 2021 to 2025
$21.2M
High Spatial and Temporal Resolution MRI Mapping of Oxygen Consumption in HumansP41EB029460 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI Ravinder Reddy · 2021 to 2026
$7.6M
Artificial Intelligence Strategies for Alzheimer's Disease ResearchU01AG066833 · NIA · CEDARS-SINAI MEDICAL CENTER · PI MOORE, JASON H., RITCHIE, MARYLYN D · 2022 to 2025
$6.7M
Early mid-life environmental toxicant exposures and AD/ADRD risk in CARDIAU01AG088658 · NIA · UNIVERSITY OF PENNSYLVANIA · PI Aimin Chen, Lifang Hou · 2024 to 2026
$6.5M
VASCULAR EFFECTS OF DIETARY SALT IN HUMANS WITH SALT-RESISTANT BPR01HL104106 · NHLBI · UNIVERSITY OF DELAWARE · PI EDWARDS, DAVID G, FARQUHAR, WILLIAM B · 2011 to 2021
$4.5M
Targeting Skeletal Muscle Perfusion and Oxidative Capacity in HFpEFR01HL155599 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI ZAMANI, PAYMAN · 2021 to 2025
$3.9M
Cardiovascular Risk, Vascular and Kidney Damage in COVID-19 SurvivorsR01HL157108 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI JULIO ALONSO CHIRINOS MEDINA, Jordana B. Cohen · 2022 to 2026
$3.9M
Ethical Multimodal AI Development for Obesity, Diabetes and Digestive DiseaseOT2OD038048 · OD · UNIVERSITY OF PENNSYLVANIA · PI Walter R.T. Witschey · 2025 to 2026
$3.4M
Blockade of calcium channels and beta adrenergic receptors for physiologic abnormalities in heart failure with preserved ejection fraction (BLOCK HFpEF)R01HL153646 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI COHEN, JORDANA B. · 2020 to 2024
$3.2M
NCATS NIH HHS U01 TR003734NCATS NIH HHS UL1 TR001878NHLBI NIH HHS F31 HL182332NHLBI NIH HHS P01 HL094307NHLBI NIH HHS R01 HL104106NHLBI NIH HHS R01 HL121510NHLBI NIH HHS R01 HL133889NHLBI NIH HHS R01 HL137984NHLBI NIH HHS R01 HL153646NHLBI NIH HHS R01 HL155599NHLBI NIH HHS R01 HL155764NHLBI NIH HHS R01 HL157108NHLBI NIH HHS R01 HL169378NHLBI NIH HHS R03 HL146874NHLBI NIH HHS R33 HL146390NHLBI NIH HHS R56 HL136730NHLBI NIH HHS U01 HL160277NIA NIH HHS K24 AG070459NIA NIH HHS P30 AG073105NIA NIH HHS R01 AG058969NIA NIH HHS U01 AG066833NIA NIH HHS U01 AG088658NIBIB NIH HHS P41 EB029460NIBIB NIH HHS R01 EB031722NIBIB NIH HHS R21 EB036734NIH HHS OT2 OD038048
6 · The paper itself

Abstract

Generalizable foundation models for computed tomographic (CT) medical imaging data are emerging AI tools anticipated to vastly improve clinical workflow efficiency. However, existing models are typically trained within narrow imaging contexts, including limited anatomical coverage, contrast settings, and clinical indications. These constraints reduce their ability to generalize across the broad spectrum of real-world presentations encountered in volumetric CT imaging data. We introduce Percival, a vision-language foundation model trained on over 400,000 CT volumes and paired radiology reports from more than 50,000 participants enrolled in the Penn Medicine BioBank. Percival employs a dual-encoder architecture with a transformer-based image encoder and a BERT-style language encoder, aligned via symmetric contrastive learning. Percival was validated on over 20,000 participants imaging data encompassing over 100,000 CT volumes. In image-text recall tasks, Percival outperforms models trained on limited anatomical windows. To assess Percival's clinical knowledge, we evaluated the biologic, phenotypic and prognostic relevance using laboratory-wide, phenome-wide association studies and survival analyses, uncovering a rich latent structure aligned with physiological measurements and disease phenotypes.

Indexed as

Computed tomographyfoundation modelPenn Medicine BioBankvision-language model

Identifiers

PMID40630577
PMCPMC12236870

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.