Evidence map›Paper›PMID 40628650›Full record

ArticleJournal of the American Chemical Society2025

Activity-Based Tracking of Glycan Turnover in Microbiomes.

Conor J Crawford, Greta Reintjes, Vipul Solanki, Manuel G Ricardo, Jens Harder, Rudolf Amann, Jan-Hendrik Hehemann, Peter H Seeberger

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Conor J CrawfordMax Planck Institute for Colloids and Interfaces, Potsdam 14476, Germany.ORCID 0000-0002-1314-1019
Greta ReintjesFaculty of Biology/Chemistry, University of Bremen, Bremen 28359, Germany.
Vipul SolankiMax Planck Institute for Marine Microbiology, Bremen 28359, Germany.
Manuel G RicardoMax Planck Institute for Colloids and Interfaces, Potsdam 14476, Germany.
Jens HarderMax Planck Institute for Marine Microbiology, Bremen 28359, Germany.
Rudolf AmannMax Planck Institute for Marine Microbiology, Bremen 28359, Germany.
Jan-Hendrik HehemannFaculty of Biology/Chemistry, University of Bremen, Bremen 28359, Germany.
Peter H SeebergerMax Planck Institute for Colloids and Interfaces, Potsdam 14476, Germany.ORCID 0000-0003-3394-8466

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycans shape microbiomes in the ocean and the gut, driving key steps in the global carbon cycle and human health. Yet, our ability to track microbial glycan turnover across microbiomes is limited, as identifying active degraders without prior genomic knowledge remains a key challenge. Here, we introduce an activity-based fluorescence resonance energy transfer (FRET) probe that enables direct visualization and quantification of glycan metabolism in complex microbial communities. As a proof of concept, we investigated α-mannan degradation, a prominent polysaccharide in algal blooms. Using automated glycan assembly, we synthesized a mannan hexasaccharide bearing a fluorescein-rhodamine FRET pair. The probe was validated using a recombinantly expressed

Indexed as

MicrobiotaPolysaccharidesFluorescence Resonance Energy TransferFluorescent DyesHumansMannansFluorescent DyesMannansPolysaccharides

Identifiers

PMID40628650
PMCPMC12291463

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.