Evidence map›Paper›PMID 40628531›Full record

ArticleJournal of experimental botany2025

Phylogenetic diversity of light-dependent phosphorylation of Thr78 in Rubisco activase.

Nikita Bhatnagar, Sarah S Chung, John Hodge, Sang Yeol Kim, Mia Sands, Andrew D B Leakey, Donald R Ort, Steven J Burgess

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nikita BhatnagarCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0001-7832-1347
Sarah S ChungCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0009-0005-6096-5343
John HodgeCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0003-0793-1871
Sang Yeol KimDepartment of Plant Biology, University of Illinois Urbana-Champaign, IL 61801, USA.
Mia SandsDepartment of Plant Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0002-4925-9772
Andrew D B LeakeyCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0001-6251-024X
Donald R OrtCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0002-5435-4387
Steven J BurgessCarl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, IL 61801, USA.ORCID 0000-0003-2353-7794

Funding

DOE Center for Advanced Bioenergy and Bioproducts InnovationU.S. Department of Energy, Office of Science, Biological and Environmental Research Program DE-SC0018420
6 · The paper itself

Abstract

Rubisco activase is an ATP-dependent chaperone that facilitates dissociation of inhibitory sugar phosphates from the catalytic sites of Rubisco during photosynthesis. In Arabidopsis, Rubisco activase is negatively regulated by dark-dependent phosphorylation of Thr78. The prevalence of Thr78 in Rubisco activase was investigated across sequences from 91 plant species, finding that 29 (∼32%) species shared a threonine in the same position. Analysis of seven C3 species with an antibody raised against a Thr78 phospho-peptide demonstrated that this position is phosphorylated in multiple genera. However, light-dependent dephosphorylation of Thr78 was observed only in Arabidopsis. Further, phosphorylation of Thr78 could not be detected in any of the four C4 grass species examined. The results suggest that despite conservation of Thr78 in Rubisco activase from a wide range of species, a regulatory role for phosphorylation at this site is more limited. This provides a case study for how variation in post-translational regulation can amplify functional divergence across the phylogeny of plants beyond what is explained by sequence variation in a metabolically important protein.

Indexed as

PhylogenyPlant ProteinsThreonineAmino Acid SequenceArabidopsisLightPhosphorylationPlant ProteinsThreonineArabidopsisphosphorylationphotosynthesispost-translational regulationRubisco activasesorghum

Identifiers

PMID40628531
PMCPMC12596110

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.