Evidence map›Paper›PMID 40627445›Full record

Trial reportClinical cancer research : an official journal of the American Association for Cancer Research2025

SARC028 Samples Reveal an Interplay between TGF-β, IFN Signaling, and Low HLA Class I Expression as Contributors to Ewing Sarcoma Checkpoint Blockade Resistance.

Jessica D Daley, Elina Mukherjee, David Ferraro, Shanthi Bhaskar, Anthony Green, Ernest M Meyer, Hussain Tawbi, Melissa Burgess, Tullia C Bruno, Anthony R Cillo and 1 more

Abstract readClinical Trial, Phase II
In one paragraph

Trial report in Clinical cancer research : an official journal of the American Association for Cancer Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jessica D DaleyUniversity of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.ORCID 0000-0001-5133-448X
Elina MukherjeeDepartment of Pediatrics, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-9750-7219
David FerraroDepartment of Pediatrics, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0009-0004-2849-4353
Shanthi BhaskarDepartment of Pediatrics, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0009-0009-0598-1673
Anthony GreenDepartment of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0002-5805-3004
Ernest M MeyerUPMC Hillman Cancer Center, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.ORCID 0009-0003-0984-4410
Hussain TawbiUT MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0003-1942-851X
Melissa BurgessUPMC Hillman Cancer Center, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.ORCID 0000-0002-5753-1422
Tullia C BrunoUPMC Hillman Cancer Center, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.ORCID 0000-0002-6433-0207
Anthony R Cillo *UPMC Hillman Cancer Center, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.ORCID 0000-0002-3213-3129
Kelly M Bailey *University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.ORCID 0000-0003-3925-3243

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 1988 to 2026
$158.0M
Molecular Basis of Pediatric DiseaseK12HD052892 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TERENCE S. DERMODY · 2007 to 2026
$6.5M
Research Training Program for Pediatric Subspecialty FellowsT32HD071834 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TERENCE S. DERMODY · 2013 to 2026
$4.7M
DNA Damage and Immunogenicity in Ewing SarcomaK08CA252178 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAILEY, KELLY · 2021 to 2025
$765k
High-Throughput Computing for Genomics and Bioinformatics ResearchS10OD028483 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEE, ADRIAN V · 2021 to 2021
$574k
Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) K12HD052892-15National Cancer Institute (NCI) P30CA047904National Institutes of Health (NIH) S10OD028483National Institutes of Health (NIH) T32HD071834NCI NIH HHS K08 CA252178NCI NIH HHS P30 CA047904NICHD NIH HHS K12 HD052892NICHD NIH HHS T32 HD071834NIH HHS S10 OD028483UPMC Children's Foundation Lemieux Institute for Pediatric Cancer Research
6 · The paper itself

Abstract

purposeEwing sarcoma, in contrast to some adult sarcoma subtypes, generally does not respond to single-agent immunotherapy targeting PD1. The features of Ewing sarcoma that preclude the effectiveness of immunotherapy remain largely unknown. To address this question, we utilized biopsies from patients with Ewing sarcoma obtained before and after pembrolizumab (anti-PD1) therapy from the phase II clinical trial SARC028 to interrogate the Ewing tumor microenvironment and features associated with resistance to checkpoint inhibition. EXPERIMENTAL

designWe utilized multiplexed immunofluorescence, spatial proteomics, and spatial transcriptomics to analyze paired pretreatment and 8-week posttreatment biopsy specimens from patients with Ewing sarcoma enrolled in SARC028.

resultsPembrolizumab therapy did not alter the quantity of immune cell infiltration in Ewing tumor biopsies. Analysis of tumor-associated protein markers revealed increased immunoregulatory markers after pembrolizumab. Spatial transcriptomics identified 10 cellular neighborhoods (CN) across patients consisting of specific cell subsets. CN10 was consistently observed across patients with a poor response. This CN was enriched for a tumor subpopulation with a high TGF-β response, low IFN response, and low HLA class I expression. IFN response, HLA class I expression, and overall immune infiltration were correlated.

conclusionsAnalyses of paired Ewing sarcoma tumor samples from SARC028 reveal an immunosuppressive triad, the disruption of which should be pursued to improve antitumor immunity. This work highlights the unique insight that can be gained from the analysis of paired patient Ewing sarcoma tumor biopsy samples from clinical trials.

Indexed as

Bone NeoplasmsDrug Resistance, NeoplasmHistocompatibility Antigens Class IImmune Checkpoint InhibitorsInterferonsSarcoma, EwingTransforming Growth Factor betaAdultAntibodies, Monoclonal, HumanizedBiomarkers, TumorFemaleHumansMaleSignal TransductionTumor MicroenvironmentAntibodies, Monoclonal, HumanizedBiomarkers, TumorHistocompatibility Antigens Class IImmune Checkpoint InhibitorsInterferonspembrolizumabTransforming Growth Factor beta

Identifiers

PMID40627445
PMCPMC12402801

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.