Evidence map›Paper›PMID 40627079›Full record

ArticleThe Journal of cell biology2025

Optogenetic and chemical genetic tools for rapid repositioning of vimentin intermediate filaments.

Milena Pasolli, Joyce C M Meiring, James P Conboy, Gijsje H Koenderink, Anna Akhmanova

Abstract read
In one paragraph

Article in The Journal of cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Milena Pasolli *Cell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0001-6079-4808
Joyce C M Meiring *Cell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0001-9166-5363
James P ConboyDepartment of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, HZ Delft, The Netherlands.ORCID 0009-0001-6670-8058
Gijsje H KoenderinkDepartment of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, HZ Delft, The Netherlands.ORCID 0000-0002-7823-8807
Anna AkhmanovaCell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0002-9048-8614

Funding

EMBO long-term fellowship ALTF 261-2019European Research Council Synergy 101071793Gravitation programme IMAGINE 24.005.009Netherlands Organization for Scientific Research ECHO 711018004NWO open competition OCENW.M20.054NWO Talent Programme VI.C.182.004
6 · The paper itself

Abstract

Intermediate filaments (IFs) are a key component of the cytoskeleton, essential for regulating cell mechanics, maintaining nuclear integrity, organelle positioning, and modulating cell signaling. Current insights into IF function primarily come from studies using long-term perturbations, such as protein depletion or mutation. Here, we present tools that allow rapid manipulation of vimentin IFs in the whole cytoplasm or within specific subcellular regions by inducibly coupling them to microtubule motors, either pharmacologically or using light. Rapid perinuclear clustering of vimentin had no major immediate effects on the actin or microtubule organization, cell spreading, or focal adhesion number, but it reduced cell stiffness. Mitochondria and endoplasmic reticulum (ER) sheets were reorganized due to vimentin clustering, whereas lysosomes were only briefly displaced and rapidly regained their normal distribution. Keratin moved along with vimentin in some cell lines but remained intact in others. Our tools help to study the immediate and local effects of vimentin perturbation and identify direct links of vimentin to other cellular structures.

Indexed as

Intermediate FilamentsOptogeneticsVimentinAnimalsEndoplasmic ReticulumHeLa CellsHumansMicrotubulesMitochondriaVimentin

Identifiers

PMID40627079
PMCPMC12237251

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.