Evidence map›Paper›PMID 40624934›Full record

ArticleJournal of experimental botany2025

Multiple fertility restorer loci for cytoplasmic male sterility caused by mitochondrial gene orf137 in tomato.

Yurie Iki, Issei Harada, Kentaro Ezura, Seira Mashita, Kosuke Kuwabara, Hitomi Takei, Atsushi Toyoda, Kenta Shirasawa, Tohru Ariizumi

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Tomato.Journal of experimental botany · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yurie IkiGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.ORCID 0009-0003-6636-9003
Issei HaradaGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
Kentaro EzuraInstitute of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.ORCID 0000-0002-2303-3396
Seira MashitaGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
Kosuke KuwabaraGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
Hitomi TakeiGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
Atsushi ToyodaAdvanced Genomics Center, National Institute of Genetics, Mishima, Shizuoka 411-0801, Japan.ORCID 0000-0002-0728-7548
Kenta ShirasawaDepartment of Frontier Research and Development, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.ORCID 0000-0001-7880-6221
Tohru AriizumiInstitute of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.ORCID 0000-0003-3221-2369

Funding

JSPS KAKENHI 17H03761JSPS KAKENHI 18J20505JSPS KAKENHI 21H02181JSPS KAKENHI 21J20479JSPS KAKENHI 22H04925JSPS KAKENHI 22H05172JSPS KAKENHI 22H05181Kazusa DNA Research Institute FoundationProject of the Bio-oriented Technology Research Advancement InstitutionResearch Program on Development of Innovative Technology JPJ007097
6 · The paper itself

Abstract

Cytoplasmic male sterility (CMS) in plants is caused by incompatibility between nuclear and cytoplasmic genetic information. Fertility can be restored through the action of fertility restorer (RF) genes, which are usually present in the nucleus. CMS lines of tomato (Solanum lycopersicum) caused by mitochondrial gene orf137 have been developed from asymmetric cell fusions, and in these lines, cultivated tomato served as a nuclear donor and its wild relative, S. acaule, as a cytoplasm donor. Although RF genes are present in wild relatives of tomato, no genetic or genomic information on the RF genes is yet available. This study reports an RF genetic locus, RF1, on chromosome 1 of S. pimpinellifolium LA1670 and S.  lycopersicum var. cerasiforme LA1673, which was revealed by bulked segregant analysis and sequencing. An additional RF locus, RF2, was identified on chromosome 2 of LA1670. The genomic sequence of S. cheesmaniae LA0166 was assembled using high-fidelity, long-read sequencing technology. Sequence comparisons identified further candidate RF genes on chromosome 1 of S. cheesmaniae LA0166. These results suggested that multiple gene loci control the fertility restoration trait in wild relatives of tomato.

Indexed as

Genes, MitochondrialGenes, PlantPlant InfertilityPlant ProteinsSolanum lycopersicumCytoplasmFertilityPlant ProteinsCytoplasmic male sterilityF1 seed productionfertility restorationgenometomato

Identifiers

PMID40624934
PMCPMC12646146

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.