Evidence map›Paper›PMID 40624625›Full record

ArticleBMC microbiology2025

Genomic insights into tigecycline non-susceptibility in Clostridioides difficile: the role of the Tet P determinant and efflux mechanisms.

Zijun Dang, Peiwen Xia, Jinzhu Huang, Bingxue Yang, Jiajia Liao, Qi Han, Yun Xia

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zijun Dang *Department of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Peiwen Xia *Department of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Jinzhu HuangDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Bingxue YangDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Jiajia LiaoDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Qi HanDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China.
Yun XiaDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, No.1 Youyi Road, Yuzhong District, Chongqing, 400016, China. xiayun12cn@aliyun.com.

Funding

the Chongqing Science and Technology Commission's key projects cstc2019jscx-gksbX0062
6 · The paper itself

Abstract

backgroundClostridioides difficile infection (CDI) is a significant cause of nosocomial infections, often arising from antibiotic-induced disruption of the normal gut microbiota, enabling C. difficile proliferation. Tigecycline has proven effective in treating refractory CDI, with resistance to this antibiotic being rare. However, our previous study identified six C. difficile isolates that were non-susceptible to tigecyclin.

methodsTo investigate the mechanisms underlying reduced tigecycline susceptibility, the genome of C. difficile strain 16338, which is non-susceptible to tigecycline, was characterized. The tetA(P), tetB(P), and Tet P (including 2,000 bp upstream), were individually cloned into recombinant plasmids and transferred into Escherichia coli to assess their contribution to tigecycline resistance. The role of promoter and terminator sequences was explored by comparing the minimum inhibitory concentrations (MICs) of strains with different combinations. Efflux pump involvement in resistance was evaluated using efflux pump inhibitors.

resultsWhole-genome sequencing revealed that C. difficile 16338 lacked plasmids and contained the Tet P determinant on its chromosome. The Tet P determinant contains two coding genes, tetA(P) and tetB(P), and is associated with an insertion sequence containing an 11-bp repeat sequence, which may serve as a recombination site facilitating gene transfer. E. coli strains carrying tetP, tetA(P), or tetB(P) exhibited a 1-fold increase in MIC for tigecycline. Additionally, tetA(P) and tetB(P) primarily mediate resistance to tetracycline (MIC = 32 mg/L) and minocycline (MIC = 32 mg/L), respectively. In addition, strains carrying different P3 promoters and T1 terminator sequences exhibited varying MICs for tigecycline. Efflux pumps were implicated in tigecycline resistance, as inhibitors (CCCP and reserpine) reduced MIC by one-fold.

conclusionThis study identified the Tet P determinant and its related encoding genes tetA(P) and tetB(P) as genetic factors associated with reduced susceptibility to tigecycline in C. difficile. The tetA(P) and tetB(P) genes mediate different resistance to tetracycline and minocycline, showing substrate specificity. Although the efflux mechanism is associated with reduced susceptibility to tigecycline, further studies are needed to determine whether it is only the efflux pump encoded by tetA(P) that is responsible. These findings enhance our understanding of tigecycline resistance in C. difficile and lay the foundation for future studies of potential resistance mechanisms.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsClostridioides difficileDrug Resistance, BacterialTigecyclineClostridium InfectionsEscherichia coliGenome, BacterialGenomicsHumansMicrobial Sensitivity TestsPlasmidsWhole Genome SequencingAnti-Bacterial AgentsBacterial ProteinsTigecyclineClostridioides difficileTet PTigecycline resistanceWhole genome sequencing

Identifiers

PMID40624625
PMCPMC12232799

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.