Evidence map›Paper›PMID 40624458›Full record

ArticleBMC genomic data2025

The global prevalence and genetic spectrum of primary carnitine deficiency.

Liu Sun, Ke Yao, Hang-Jing Wu

Abstract read
In one paragraph

Article in BMC genomic data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Liu SunDepartment of Computer Science, School of Engineering, Yuxi Normal University, Yuxi, 653100, China. sunliu@yxnu.edu.cn.
Ke YaoEye Center of Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, 310009, China.
Hang-Jing WuEye Center of Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, 310009, China. hangjing.wu@zju.edu.cn.

Funding

Central guidance for local scientific and technological development funding projects 2024ZY01057the Eye Center of the Second Affiliated Hospital, School of Medicine, Zhejiang University 18612022
6 · The paper itself

Abstract

backgroundPrimary carnitine deficiency (PCD) is an autosomal recessive rare disorder of carnitine cycle and carnitine transport caused by pathogenic variants in the SLC22A5 gene. The prevalence of PCD is unclear. This study aimed to estimate the carrier frequency and genetic prevalence of PCD using Genome Aggregation Database (gnomAD) data.

methodsThe pathogenicity of SLC22A5 variants was interpreted according to the American College of Medical Genetics and Genomics (ACMG) standards and guidelines. The minor allele frequency (MAF) of the variants of the SLC22A5 gene in 807,162 individuals was examined to estimate the global prevalence of PCD in nine ethnicities: African/African American (afr), Admixed American (amr), East Asian (eas), Non-Finnish European (nfe), South Asian (sas), Ashkenazi Jewish (asj), Middle Eastern (mid), Finnish (fin) and Remaining individuals (rmi). The global and population-specific carrier frequency and genetic prevalence of PCD were calculated using the Hardy-Weinberg equation.

resultsTotal of 213 pathogenic/likely pathogenic variants (PV/LPV) of the SLC22A5 gene were identified according to the ACMG standards and guidelines. The global carrier frequency and genetic prevalence of PCD were 10.6 per thousand (1/95) and 28.2 per million (1/35427), respectively.

conclusionsThe prevalence of PCD is estimated to be 1/35,000 globally, with a range of between 1/450,000 and 1/20,000 depending on ethnicity.

Indexed as

CardiomyopathiesCarnitineHyperammonemiaMuscular DiseasesSolute Carrier Family 22 Member 5Gene FrequencyHumansPrevalenceCarnitineSLC22A5 protein, humanSolute Carrier Family 22 Member 5Carrier frequencyGenetic prevalenceGenome aggregation database (gnomAD)Organic cation/Carnitine transporter 2 (OCTN2)Primary carnitine deficiency (PCD)Rare diseasesSolute carrier family 22 member 5 (SLC22A5)

Identifiers

PMID40624458
PMCPMC12235876

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.