Evidence map›Paper›PMID 40620770›Full record

ArticlePeerJ2025

MDDeep-Ace: species-specific acetylation site prediction based on multi-domain adaptation.

Yu Liu, Chaofan Ye, Can Lin, Kangkang Mao, Ming Zhu

Abstract read
In one paragraph

Article in PeerJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yu LiuSchool of Integrated Circuits, Anhui University, Hefei City, Anhui, China.
Chaofan YeSchool of Integrated Circuits, Anhui University, Hefei City, Anhui, China.
Can LinSchool of Integrated Circuits, Anhui University, Hefei City, Anhui, China.
Kangkang MaoSchool of Integrated Circuits, Anhui University, Hefei City, Anhui, China.
Ming ZhuSchool of Integrated Circuits, Anhui University, Hefei City, Anhui, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Lysine post-translational modification (PTM) is pivotal in regulating diverse cellular processes, profoundly impacting protein structure and function. Over recent decades, numerous experimental techniques have advanced PTM site identification, significantly contributing to research progress. However, these methods are time-intensive and labor-intensive. Deep learning technologies have shown promise in predicting PTM sites, yet current approaches struggle with species-specific PTM site prediction. Methods: We introduce MDDeep-Ace, a novel deep learning method based on multi-domain adaptation for predicting lysine acetylation sites. By integrating data from multiple species, MDDeep-Ace enhances the generalization of species-specific prediction models, improving predictive performance. Results: Experimental findings illustrate that our proposed multi-domain adaptation approach significantly enhances prediction accuracy across multiple species, surpassing existing lysine acetylation site prediction tools.

Indexed as

Computational BiologyDeep LearningLysineProtein Processing, Post-TranslationalAcetylationAnimalsHumansSpecies SpecificityLysineAcetylationDeep learningMulti-domain adaptationSpecies-specific

Identifiers

PMID40620770
PMCPMC12229145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.