Evidence map›Paper›PMID 40618161›Full record

ReviewEpigenetics & chromatin2025

Molecular mechanisms and biological functions of active DNA demethylation in plants.

Ruixian Zhu, Yan Xue, Weiqiang Qian

Abstract readReview
In one paragraph

Review in Epigenetics & chromatin, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Telomere-to-telomere genome ofHorticulture research · 2026
    Article
  2. Review
  3. Frontiers in plant science · 2026
    Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ruixian ZhuState Key Laboratory of Wheat Improvement, School of Advanced Agricultural Sciences, Peking University, Beijing, 100871, China.
Yan XueState Key Laboratory of Wheat Improvement, Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences in Weifang, Shandong, 261325, China. yan.xue@pku-iaas.edu.cn.
Weiqiang QianState Key Laboratory of Wheat Improvement, School of Advanced Agricultural Sciences, Peking University, Beijing, 100871, China. wqqian@pku.edu.cn.

Funding

Natural Science Foundation of China 32270288
6 · The paper itself

Abstract

DNA methylation is a conserved epigenetic modification that plays important roles in silencing transposable elements, regulating gene expression, and maintaining genome stability. In plants, DNA methylation is de novo established by the RNA-directed DNA methylation pathway and maintained during each cell cycle. It can be actively removed by the REPRESSOR OF SILENCING 1/DEMETER family proteins through the base excision repair pathway. Active DNA demethylation is essential for plant growth, development, reproduction and stress adaptation. During the past two decades, significant progress has been made in our understanding of active DNA demethylation. In this review, we will discuss the molecular mechanisms, regulation, and biological functions of active DNA demethylation in plants.

Indexed as

DNA DemethylationDNA MethylationPlantsDNA RepairEpigenesis, GeneticGene Expression Regulation, PlantActive DNA demethylationBase excision repairDMEDNA methylationEpigeneticsROS1

Identifiers

PMID40618161
PMCPMC12228296

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.