Evidence map›Paper›PMID 40618012›Full record

ArticleBMC microbiology2025

Validation of stool and blood analysis compared to Inv A and ttr based direct blood qPCR assay as diagnostic tools for typhoid fever.

Shymaa A Elaskary, Hanem Mohamed Badawy, Doaa S Elgendy, Amany Mohammed Abdelmaksoud, Rasha G Mostafa

Abstract readComparative StudyValidation Study
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shymaa A ElaskaryMedical Microbiology and Immunology Department, Faculty of Medicine, Menoufia University, Shebin al-Kom, Egypt. dr.shaimaaelaskary@yahoo.com.ORCID 0000-0003-0588-9761
Hanem Mohamed BadawyClinical Pathology Department, Faculty of Medicine, Menoufia University, Shebin al-Kom, Egypt.
Doaa S ElgendyInternal Medicine Department, Faculty of Medicine, Menoufia University, Shebin al-Kom, Egypt.
Amany Mohammed AbdelmaksoudClinical Pathology Department, Faculty of Medicine, Menoufia University, Shebin al-Kom, Egypt.
Rasha G MostafaMedical Microbiology and Immunology Department, Faculty of Medicine, Menoufia University, Shebin al-Kom, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe development of molecular techniques, such as polymerase chain reaction (qPCR), provides a promising approach for detecting S. enterica due to its rapidity, sensitivity, specificity, and resistance to interference from antibiotics, surpassing the routinely used stool and blood culture methods.

aimThis study aims to compare different stool and blood culturing methods with the direct blood qPCR-based assay of Salmonella Invasion A (Inv A) and Salmonella Tetrathionate Respiration (ttr) virulence genes as diagnostic tools for typhoid fever.

methodOne hundred clinically diagnosed typhoid fever (CDTF) cases were subjected to conventional stool and blood culture, followed by standard biochemical and serotyping identification of S. enterica, compared to direct blood and enriched blood-based ttr and Inv A qPCR-based techniques.

resultsUsing the enriched blood-based ttr and Inv A qPCR technique, 90% and 85% of cases, respectively, were positive and confirmed as typhoid fever. While the blood-based ttr and Inv A qPCR technique showed 82% and 80% positivity, respectively, with a Ct threshold value of 37 cycles for both techniques. The stool culture method revealed S. enterica infection in only 32% of cases, while blood culture methods identified S. enterica in 48% of cases.

conclusionThe enriched blood-based ttr and Inv A qPCR method is a promising rapid tool for diagnosing typhoid fever, offering high sensitivity, specificity, accuracy and unaffected by antibiotic intake.

Indexed as

Bacterial ProteinsBloodFecesMolecular Diagnostic TechniquesReal-Time Polymerase Chain ReactionSalmonella entericaSalmonella typhiTyphoid FeverAdolescentAdultAgedBlood CultureChildChild, PreschoolFemaleHumansBacterial ProteinsinvA protein, BacteriaBlood microbiologyPolymerase chain reaction (PCR)Salmonella infectionsStool microbiologyTetrathionate respiration genes & Inv A gene detectionTyphoid fever

Identifiers

PMID40618012
PMCPMC12228386

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.