Evidence map›Paper›PMID 40616259›Full record

ArticleThe American journal of case reports2025

Whole-Genome Sequencing of Blood-Isolated Lactobacillus johnsonii in Thailand: Clinical Implications and Public Health Relevance.

Arnon Chukamnerd, Komwit Surachat, Sarunyou Chusri, Sorawit Chittrakarn

Abstract readCase Reports
In one paragraph

Article in The American journal of case reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Multifunctional antimicrobial effects ofFrontiers in immunology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Arnon ChukamnerdDivision of Infectious Diseases, Department of Internal Medicine, Faculty of Medicine, Prince of Songkla University, Songkhla, Thailand.ORCID 0000-0001-6999-5534
Komwit SurachatDepartment of Biomedical Sciences and Biomedical Engineering, Faculty of Medicine, Prince of Songkla University, Songkhla, Thailand.
Sarunyou ChusriDivision of Infectious Diseases, Department of Internal Medicine, Faculty of Medicine, Prince of Songkla University, Songkhla, Thailand.
Sorawit ChittrakarnDivision of Infectious Diseases, Department of Internal Medicine, Faculty of Medicine, Prince of Songkla University, Songkhla, Thailand.ORCID 0009-0007-8115-3955

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Lactobacillus johnsonii is a probiotic bacterium commonly found in the gastrointestinal tracts of humans and other animals. It is non-pathogenic and plays a crucial role in maintaining gut health. L. johnsonii is often associated with beneficial effects on the host immune system and digestion.         However, reports of L. johnsonii infections are rare, and their clinical characteristics remain poorly understood. This article reports a case of L. johnsonii isolated from a patient's blood - the first such case documented in Thailand. Whole-genome sequencing (WGS) was performed on the isolate (LJ-PSU-blood) to investigate its genomic characteristics. CASE REPORT A 25-year-old Thai woman with a large abdominal mass was diagnosed with diffuse large B-cell lymphoma, and she was started on rituximab-cyclophosphamide, hydroxydaunorubicin, oncovin, and prednisolone chemotherapy. During her first rituximab infusion, she developed a fever, tachypnea, and tachycardia. Her blood cultures revealed an organism after 1 day. L. johnsonii was initially identified and subjected to WGS, and the sequence data were analyzed using bioinformatics tools. The findings demonstrated that the LJ-PSU-blood isolate possessed antibiotic resistance and virulence-associated genes. In addition, this isolate harbored bacteriocin-encoding genes and integrated bacteriophage sequences. Our genome was compared with 21 published genomes from various countries, hosts, and isolation sources. They were grouped into 3 monophyletic clades based on single-nucleotide polymorphism distances. CONCLUSIONS This case report describes the characteristics of L. johnsonii isolated from the blood of a Thai patient. Clinical and WGS data highlight important public health concerns associated with L. johnsonii infections.

Indexed as

Gram-Positive Bacterial InfectionsLactobacillusWhole Genome SequencingAdultFemaleGenome, BacterialHumansPublic HealthThailand

Identifiers

PMID40616259
PMCPMC12239681

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.