Evidence map›Paper›PMID 40616179›Full record

ArticleAlzheimer's research & therapy2025

Machine-learning based strategy identifies a robust protein biomarker panel for Alzheimer's disease in cerebrospinal fluid.

Xiaosen Hou, Yunjie Qiu, Hui Li, Yan Yan, Dongxu Zhao, Simei Ji, Junjun Ni, Jun Zhang, Kefu Liu, Hong Qing and 1 more

Abstract read
In one paragraph

Article in Alzheimer's research & therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Xiaosen Hou *Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Yunjie Qiu *Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Hui LiKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Yan YanKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Dongxu ZhaoKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Simei JiDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen, Guangdong Province, China.
Junjun NiKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Jun ZhangKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China.
Kefu LiuMOE Key Laboratory of Rare Pediatric Diseases & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan Province, China. liukefu@csu.edu.cn.ORCID 0000-0003-1168-8712
Hong QingKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China. hqing@bit.edu.cn.ORCID 0000-0003-2820-450X
Zhenzhen QuanKey Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, China. qzzbit2015@bit.edu.cn.ORCID 0000-0002-2557-0371

Funding

Beijing Municipal Natural Science Foundation IS23093Beijing Nova Program 20220484083, 20230484436Ministry of Science and Technology of the People's Republic of China STI2030-Major Projects 2022ZD0206800Sichuan Science and Technology Program 2024YFHZ0010the National Natural Science Foundation of China 82371441the National Natural Science Foundation of China 82371446
6 · The paper itself

Abstract

backgroundThe complex pathogenesis of Alzheimer's disease (AD) has resulted in limited current biomarkers for its classification and diagnosis, necessitating further investigation into reliable universal biomarkers or combinations.

methodsIn this work, we collect multiple CSF proteomics datasets and build a universal diagnose model by SVM-RFECV method combined with equal sample size and standard normalization design. The model was training in 297_CSF and then test the effect in other datasets.

resultsUtilizing machine learning, we identify a 12-protein panel from cerebrospinal fluid proteomic datasets. The universal diagnosis model demonstrated strong diagnostic capability and high accuracy across ten different AD cohorts across different countries and different detection technologies. These proteins involved in various biological processes related to AD and shows a tight correlation with established AD pathogenic biomarkers, including amyloid-β, tau/p-tau, and the Montreal Cognitive Assessment score. The high accuracy in the model may due to multiple protein combination based on comprehensive pathogenesis and different AD progress. Furthermore, it effectively differentiates AD from mild cognitive impairment (MCI) and other neurodegenerative disorders, especially the frontotemporal dementia (FTD), which share similar pathogenesis as AD.

conclusionThis study highlights a high accuracy, robustness and compatibility model of 12-protein panel whose detection is even based on label-free, TMT and DIA mass spectrometry or ELISA technologies, implicating its potential prospect in clinical application.

Indexed as

Alzheimer DiseaseBiomarkersMachine LearningAgedAmyloid beta-PeptidesCognitive DysfunctionFemaleHumansMaleProteomicstau ProteinsAmyloid beta-PeptidesBiomarkerstau ProteinsAlzheimer’s diseaseBiomarkerCerebrospinal fluidMachine learning

Identifiers

PMID40616179
PMCPMC12232211

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.