Evidence map›Paper›PMID 40615462›Full record

ArticleScientific data2025

Chromosome-level genome assembly of the ornamental plant Alcea rosea.

Xi Chen, Xiu Li, Shengwen Tang, Jiao Ma, Zhangshun Zhu, Fangwen Li, Xiaoqing Shi

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xi ChenChengdu Botanical Garden, Chengdu, Sichuan, China.
Xiu LiChengdu Botanical Garden, Chengdu, Sichuan, China.
Shengwen TangChengdu Botanical Garden, Chengdu, Sichuan, China.
Jiao MaChengdu Botanical Garden, Chengdu, Sichuan, China.
Zhangshun ZhuChengdu Botanical Garden, Chengdu, Sichuan, China.
Fangwen LiChengdu Botanical Garden, Chengdu, Sichuan, China.
Xiaoqing ShiChengdu Botanical Garden, Chengdu, Sichuan, China. shixiaoqing87@126.com.ORCID 0000-0002-8907-510X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alcea rosea, a member of the Malvaceae family, is celebrated for its rich floral palette and global horticultural significance. Here, we present a high-quality reference genome for A. rosea, achieving a genome assembly size of 1.01 Gbp, with a Contig N50 length of 36.61 Mbp. The genome sequence was successfully mapped to 21 chromosomes, and the scaffold N50 length reached 52.57 Mbp, with a scaffold genome completeness of 99.6%. A total of 565.84 Mbp (comprising 56% of the genome) of repetitive sequences were identified, with transposable elements being predominant, particularly long terminal repeat (LTR) elements, which accounted for 48.44% of the genome. 51,436 genes were annotated. Among these predicted genes, the average gene length and coding sequence (CDS) length were 2739.92 bp and 1242.54 bp, respectively.

Indexed as

Chromosomes, PlantGenome, PlantDNA Transposable ElementsRepetitive Sequences, Nucleic AcidTerminal Repeat SequencesDNA Transposable Elements

Identifiers

PMID40615462
PMCPMC12227575

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.