Evidence map›Paper›PMID 40615439›Full record

ArticleScientific data2025

MelanoDB: A dataset of clinical and molecular features of patients with advanced melanoma treated with MAPK inhibitors.

Sarah Dandou, Julie A Vendrell, Jérôme Solassol, Baptiste Louveau, Céleste Lebbé, Samia Mourah, Florian Rambow, Eric Richard, Stanislas Du Manoir, Alain Mangé and 3 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sarah DandouIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.
Julie A VendrellLaboratoire de Biologie des Tumeurs Solides, Département de Pathologie et Oncobiologie, Centre Hospitalier Universitaire (CHU) Montpellier, Université de Montpellier, Montpellier, France.
Jérôme SolassolIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.
Baptiste LouveauDepartment of Pharmacology and Tumor Genomics, Hôpital Saint Louis, Assistance Publique-Hôpitaux de Paris, F-75010, Paris, France.
Céleste LebbéUniversité Paris Cité, AP-HP Dermato-oncology and CIC, Cancer institute AP-HP Nord Paris Cité, INSERM U976, Saint Louis Hospital, Paris, France.
Samia MourahDepartment of Pharmacology and Tumor Genomics, Hôpital Saint Louis, Assistance Publique-Hôpitaux de Paris, F-75010, Paris, France.
Florian RambowDepartment of Applied Computational Cancer Research, Institute for AI in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Eric RichardIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.
Stanislas Du ManoirIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.
Alain MangéIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.ORCID 0000-0002-1566-9407
Peter J CoopmanIRCM, Université de Montpellier, ICM, Inserm, Montpellier, France.
Ovidiu Radulescu *LPHI, Université de Montpellier, CNRS, Montpellier, France.ORCID 0000-0001-6453-5707
Romain M Larive *IRCM, Université de Montpellier, ICM, Inserm, Montpellier, France. romain.larive@umontpellier.fr.ORCID 0000-0001-8479-209X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAPK inhibitors (MAPKi) have revolutionized the treatment of patients with advanced melanoma. However, primary and acquired resistance mechanisms limit their efficacy. Predicting MAPKi response from the tumor baseline features remains challenging due to the limited size of patient cohorts. Therefore, we collected data from nine different patient cohorts (total n = 417 patients with advanced melanoma treated with MAPKi) to identify clinical and molecular features. Our curated dataset, named MelanoDB, includes whole or partial exome sequencing data for 191 patients, copy number alteration information for 66 patients, and gene expression data for 132 patients. We provide a web application to explore the integrated dataset and data distribution across the collected studies, and we share this dataset with the scientific community according to the Findable, Accessible, Interoperable, Reusable (FAIR) principles.

Indexed as

MelanomaProtein Kinase InhibitorsDNA Copy Number VariationsHumansProtein Kinase Inhibitors

Identifiers

PMID40615439
PMCPMC12227540

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.