Evidence map›Paper›PMID 40613031›Full record

ArticleOncology letters2025

A novel glutamine metabolism-related risk model for prognostic prediction of liver hepatocellular carcinoma.

Xia He, Rui Wang, Yonghua Zhu, Xi Chen, Yu Zhang, Min Sun

Abstract read
In one paragraph

Article in Oncology letters, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xia HeOperating Theatre, Yixing Branch of Wuxi Medical Center of Nanjing Medical University, Yixing People's Hospital, Yixing, Jiangsu 214200, P.R. China.
Rui WangDepartment of Gastroenterology, Xuyi People's Hospital, Xuyi, Jiangsu 211700, P.R. China.
Yonghua ZhuDepartment of General Surgery, The Fourth Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu 210000, P.R. China.
Xi ChenDepartment of Hepatopancreatobiliary Surgery, Yixing Branch of Wuxi Medical Center of Nanjing Medical University, Yixing People's Hospital, Yixing, Jiangsu 214200, P.R. China.
Yu ZhangDepartment of Hepatopancreatobiliary Surgery, Yixing Branch of Wuxi Medical Center of Nanjing Medical University, Yixing People's Hospital, Yixing, Jiangsu 214200, P.R. China.
Min SunDepartment of Hepatopancreatobiliary Surgery, Yixing Branch of Wuxi Medical Center of Nanjing Medical University, Yixing People's Hospital, Yixing, Jiangsu 214200, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamine has emerged as a focus of cancer metabolism research, although its role in liver hepatocellular carcinoma (LIHC) has yet to be fully elucidated. To determine the role of glutamine metabolism in the development of LIHC, the gene expression profiles and the clinical data of patients with LIHC were obtained from The Cancer Genome Atlas database and the International Cancer Genome Consortium website. Consensus clustering was used to identify distinct molecular clusters. Functional en 10.3892/ol.2025.15149 richment analysis between clusters was performed using the Gene Ontology and Kyoto Encyclopedia of Genes and Genomes databases, and gene set variation analysis was performed. Least absolute shrinkage and selection operator and multivariate Cox regression analyses were then performed to generate a novel prognostic model. The prognostic, immune, mutational and drug-sensitive characteristics of the model were subsequently evaluated. The clinical proteomic tumor analysis consortium and reverse transcription-quantitative PCR analysis were then used to assess the protein and mRNA expression levels of the modeled genes. In addition, western blot analysis and Cell Counting Kit-8, 5-ethynyl-2'-deoxyuridine, Transwell and wound healing assays were performed to further evaluate the role of glutamate-oxaloacetate transaminase 2 (GOT2) in the pathogenesis of LIHC. Data from multiple LIHC cohorts were utilized to identify two distinct clusters of LIHC, each characterized by unique clinical and immunological features associated with different levels of glutamine metabolism-related genes. Numerous functional pathway differences were identified between these clusters, and these were demonstrated to be crucial for the onset and progression of LIHC. For modeling of glutamine metabolism-related features, patients with LIHC were divided into two groups, namely a high- and a low-risk group. Different clusters of patients with LIHC exhibited distinct characteristics in terms of their clinicopathological features, drug-sensitivity and mutations. For example, the high-risk group had a higher mutational load and was associated with a poorer prognosis compared to the low-risk group. Finally, GOT2 protein and mRNA expression levels were significantly lower in LIHC tissues compared to paracancerous tissues, and GOT2 knockdown promoted the malignant phenotype of LIHC. In conclusion, the results of the present study indicate that glutamine metabolism exerts a crucial role in the tumorigenesis and progression of LIHC, and that this is positively associated with poor prognosis. The identified glutamine metabolism-related signature was revealed to have notable accuracy in predicting the prognosis and immune characteristics of patients with LIHC. Moreover, the expression level of GOT2 was downregulated in LIHC, and a low expression of GOT2 was indicative of a poor prognosis for patients with LIHC, suggesting that the expression of GOT2 may be used as a potential therapeutic target.

Indexed as

glutamine metabolismliver hepatocellular carcinomaprediction model

Identifiers

PMID40613031
PMCPMC12214765

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.