Evidence map›Paper›PMID 40610793›Full record

ReviewThe EMBO journal2025

A million shades of green: understanding and harnessing plant metabolic diversity.

Rocky D Payet, Adnane Aouidate, Rebecca Casson, Alan Houghton, Mai-Truc Pham, Anne Osbourn

Abstract readReview
In one paragraph

Review in The EMBO journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Paclitaxel Biosynthesis Pathway Unlocked.Research (Washington, D.C.) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rocky D PayetJohn Innes Centre, Norwich Research Park, Norwich, UK. Rocky.payet@jic.ac.uk.ORCID http://orcid.org/0000-0002-6990-8418
Adnane AouidateJohn Innes Centre, Norwich Research Park, Norwich, UK.
Rebecca CassonJohn Innes Centre, Norwich Research Park, Norwich, UK.
Alan HoughtonJohn Innes Centre, Norwich Research Park, Norwich, UK.
Mai-Truc PhamJohn Innes Centre, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0003-4819-2278
Anne OsbournJohn Innes Centre, Norwich Research Park, Norwich, UK. Anne.osbourn@jic.ac.uk.ORCID http://orcid.org/0000-0003-2195-5810

Funding

Novo Nordisk Fonden (NNF) Novozymes Prize 2023UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) APP3941UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/X01097X/1Wellcome Trust 227375Wellcome Trust (WT) #227375/Z/23/Z
6 · The paper itself

Abstract

Recent developments in single-cell -omic and metabolite imaging technologies and the increasing availability of high-quality genome assemblies are having a transformative impact on the way research is carried out into plant specialised metabolism. Integrating these technologies into pathway discovery projects is therefore highly advantageous. Here, we present a general introduction into methods and workflows in specialised metabolism research. We review a range of recent methodologies, highlighting what they might be used for and common pitfalls which may be encountered. Finally, we provide a practical guide on how these technologies may be incorporated into a specialised metabolic pathway discovery pipeline for researchers who are new to the field.

Indexed as

Metabolic Networks and PathwaysMetabolomicsPlantsMetabolomeSingle-Cell AnalysisNatural ProductsPlant MetabolismSpecialised Metabolism

Identifiers

PMID40610793
PMCPMC12361408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.