Evidence map›Paper›PMID 40608330›Full record

ArticleJournal of bacteriology2025

DdiA, an XRE family transcriptional regulator, is a co-regulator of the DNA damage response in

Jana Jung, Timo Glatter, Marco Herfurth, Lotte Søgaard-Andersen

Abstract read
In one paragraph

Article in Journal of bacteriology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Construction of a linezolid-resistant strain of methicillin-susceptibleFrontiers in cellular and infection microbiology · 2026
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jana JungDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Timo GlatterCore Facility for Mass Spectrometry and Proteomics, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Marco HerfurthDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Lotte Søgaard-AndersenDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.ORCID 0000-0002-0674-0013

Funding

Max-Planck-Gesellschaft NA
6 · The paper itself

Abstract

Repair of DNA damage is essential for genome integrity. DNA damage elicits a DNA damage response (DDR) that includes error-free and error-prone, i.e., mutagenic, repair. The SOS response is a widely conserved system in bacteria that regulates the DDR and depends on the recombinase RecA and the transcriptional repressor LexA. However, RecA/LexA-independent DDRs have been identified in several bacterial species. Here, using a whole-cell, label-free quantitative proteomics approach, we map the proteomic response in

Indexed as

Bacterial ProteinsDNA DamageGene Expression Regulation, BacterialMyxococcus xanthusTranscription FactorsDNA RepairLexA Repressor ProteinMitomycinSerine EndopeptidasesSOS Response, GeneticsBacterial ProteinsLexA Repressor ProteinMitomycinSerine EndopeptidasesTranscription FactorsDNA damageDnaE2DNA repairerror-prone repairLexAmitomycin Cmutagenic repairRecASOS responseXRE transcriptional regulator

Identifiers

PMID40608330
PMCPMC12288472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.