Evidence map›Paper›PMID 40607383›Full record

ArticleFrontiers in immunology2025

ER stress genes (

Ke Zhang, Jiao Yang, Qing-Qing Yang, Jun-An Guo, Qian-Hui Huang, Chan Cui, Yue-Mei Wang, Qiao-Feng Wu, Jun-Meng Wang

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ke Zhang *Acupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Jiao Yang *Acupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Qing-Qing YangAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Jun-An GuoAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Qian-Hui HuangAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Chan CuiAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Yue-Mei WangAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Qiao-Feng WuAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Jun-Meng WangAcupuncture and Tuina College, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The role of endoplasmic reticulum stress (ERS) in the immune-inflammatory dysregulation and intestinal fibrosis associated with ulcerative colitis (UC) remains unclear. This study aims to identify ERS-related genes involved in UC fibrosis and explore potential therapeutic targets. Methods: Differentially expressed ERS-related genes (DE-ERGs) were identified through comprehensive analysis of public datasets. Machine learning methods screened VWF, MZB1, COL1A1, and LOXL2 as key regulators. Immune infiltration analysis, protein-protein interaction (PPI) network analysis, and gene set variation analysis (GSVA) were performed to clarify their roles in UC fibrosis. Drug prediction was conducted using the Connectivity Map (CMap) database, supplemented by a literature review. Results: The predicted drugs were ranked based on their binding affinities as follows: IKK-16 > Quercetin > Curcumin > Resveratrol > Budesonide > Trimebutine > Colchicine > Betamethasone > Pioglitazone > Metformin. IKK-16 showed the highest binding affinity for treating UC fibrosis. COL1A1, LOXL2, and VWF were identified as key drivers of UC intestinal fibrosis, supported by immune infiltration and PPI network analyses. Discussion: These results suggest that ERS-related genes, particularly COL1A1, LOXL2, and VWF, may regulate UC fibrosis through interactions with immune cells. IKK-16 shows promise as a therapeutic agent. These findings provide new insights into UC pathogenesis and potential clinical treatment strategies.

Indexed as

Amino Acid OxidoreductasesColitis, UlcerativeCollagen Type IEndoplasmic Reticulum StressCollagen Type I, alpha 1 ChainFibrosisGene Regulatory NetworksHumansInflammationProtein Interaction MapsAmino Acid OxidoreductasesCOL1A1 protein, humanCollagen Type ICollagen Type I, alpha 1 ChainLOXL2 protein, humanbioinformatics analysisER stressimmune infiltrationinflammationintestinal fibrosismolecular docking

Identifiers

PMID40607383
PMCPMC12213447

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.