Evidence map›Paper›PMID 40603956›Full record

ArticleScientific reports2025

CEBPD regulates CD47 and MAP4K4 via chromatin accessibility in canine mammary tumor monocytes.

Jeong-Woon Lee, Dabin Lee, Kyung-Ju Shin, Keun Hong Son, Je-Yoel Cho

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jeong-Woon LeeDepartment of Biochemistry, College of Veterinary Medicine, Seoul National University, Seoul, 08826, Korea.
Dabin LeeDepartment of Biochemistry, College of Veterinary Medicine, Seoul National University, Seoul, 08826, Korea.
Kyung-Ju ShinDepartment of Biochemistry, College of Veterinary Medicine, Seoul National University, Seoul, 08826, Korea.
Keun Hong SonDepartment of Biochemistry, College of Veterinary Medicine, Seoul National University, Seoul, 08826, Korea.
Je-Yoel ChoDepartment of Biochemistry, College of Veterinary Medicine, Seoul National University, Seoul, 08826, Korea. jeycho@snu.ac.kr.

Funding

Korean government's Ministry of Science and ICT NRF-2021R1A5A1033157
6 · The paper itself

Abstract

Circulating immune cells that have interacted with tumor tissue exhibit distinct characteristics compared to those in healthy individuals, providing potential biomarkers for tumor presence and malignancy. However, the epigenetic mechanisms governing these immune cells, particularly chromatin accessibility, remain poorly understood in cancer. In this study, we investigated chromatin accessibility and transcription factor binding in peripheral blood mononuclear cells from dogs with mammary gland tumors using ATAC-seq. Our analysis revealed significant changes in chromatin accessibility near genes associated with immune function, neuronal activity, and lipid metabolism. Notably, we identified CEBPD-bound peaks that were upregulated in PBMCs from tumor-bearing dogs and demonstrated that the transcription of their associated genes, CD47 and MAP4K4, was also elevated in monocytes under cancer co-culture conditions. This effect was mitigated following CRISPR interference of these regulatory regions. These findings highlight the crucial role of chromatin accessibility in shaping the immune response to cancer and suggest potential therapeutic targets for immune modulation.

Indexed as

CD47 AntigenChromatinMammary Neoplasms, AnimalMonocytesAnimalsDogsFemaleGene Expression Regulation, NeoplasticCD47 AntigenChromatinATAC-seqChromatin accessibilityCRISPR interferenceImmunityMammary tumorPBMC

Identifiers

PMID40603956
PMCPMC12223031

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.