Evidence map›Paper›PMID 40603627›Full record

ArticleWorld journal of microbiology & biotechnology2025

Identification and comprehensive genomic characterization of cellulolytic Bacillus species reveal unique CAZyme profiles for leaf litter degradation and compost production.

Arvind Kumar Singh, Subhojit Datta, Girindrani Dutta, Tinku Goswami, Pranit Mukherjee, Bijan Majumdar, Gouranga Kar

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Article in World journal of microbiology & biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Genomic sequencing of vineyard-isolatedFrontiers in microbiology · 2026
    Article
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Arvind Kumar SinghICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India. singhak30@gmail.com.
Subhojit DattaICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India. subhojitdatta1@gmail.com.
Girindrani DuttaICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India.
Tinku GoswamiICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India.
Pranit MukherjeeICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India.
Bijan MajumdarICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India.
Gouranga KarICAR-Central Research Institute for Jute and Allied Fibres, Nilganj, Barrackpore, Kolkata, West Bengal, 700121, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf litter, abundant in lignocellulosic materials, is difficult to degrade, hindering efficient composting in agriculture. This study focused on isolating and identifying Bacillus species with strong cellulolytic activity to improve leaf litter decomposition under subtropical agro-climatic conditions. Three bacterial strains, B1S, B1M, and B1D were isolated from composted leaf litter and characterized through morphological, biochemical, and enzymatic analyses. B1S, identified as Bacillus stercoris, exhibited the highest total cellulase (0.818 ± 0.026 fpu/ml) and endoglucanase (25.674 ± 2.085 CMCase/mL) activities. B1D showed the highest β-glucosidase activity (3.561 ± 0.088 IU/mL). Optimal cellulase activity for B1S occurred at pH 5.0 and 37 °C. Inoculating compost piles with a mix of these strains significantly reduced composting time from 100 to 50 days, with a cellulose degradation rate of 45.18%. The study included whole genome sequencing of B1S (~ 4.2 Mb, 4184 coding sequences), revealing genes encoding key carbohydrate-active enzymes (CAZymes) such as glycoside hydrolases (GH5), carbohydrate-binding modules (CBM3), and auxiliary activity enzymes (AA), confirming its lignocellulolytic capacity. Taxonomic analysis using TYGS and genome-wide phylogeny validated its identity as Bacillus stercoris. Functional annotations through RAST, KEGG, and COG databases indicated enrichment in genes related to carbohydrate and amino acid metabolism, quorum sensing, and environmental adaptation. The presence of unique gene clusters and mobile genetic elements suggests genomic flexibility. These findings demonstrate the potential of Bacillus stercoris as a valuable microbial tool for sustainable composting and underscore the importance of genome-based approaches in microbial functional and taxonomic studies.

Indexed as

BacillusCompostingPlant LeavesBacterial Proteinsbeta-GlucosidaseCellulaseCelluloseGenome, BacterialGenomicsHydrogen-Ion ConcentrationLigninPhylogenySoil MicrobiologyTemperatureWhole Genome SequencingBacterial Proteinsbeta-GlucosidaseCellulaseCelluloseLigninlignocelluloseBacillus spp.BioinoculantsCarbohydrate-active enzymesCellulaseLeaf litter compostingWhole-genome sequencing

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.