Evidence map›Paper›PMID 40603603›Full record

ArticleNature chemistry2025

Homotypic RNA clustering accompanies a liquid-to-solid transition inside the core of multi-component biomolecular condensates.

Tharun Selvam Mahendran, Gable M Wadsworth, Anurag Singh, Ritika Gupta, Priya R Banerjee

Abstract read
In one paragraph

Article in Nature chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Single-Molecule Dwell Times in Biomolecular Condensates.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Distinguishing near- versus off-critical phase behaviors of intrinsically disordered proteins.Reports on progress in physics. Physical Society (Great Britain) · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Tharun Selvam MahendranDepartment of Biological Sciences, The State University of New York at Buffalo, Buffalo, NY, USA.ORCID 0000-0002-7536-1236
Gable M WadsworthDepartment of Physics, The State University of New York at Buffalo, Buffalo, NY, USA.ORCID 0000-0002-0417-9613
Anurag SinghDepartment of Physics, The State University of New York at Buffalo, Buffalo, NY, USA.ORCID 0000-0002-8132-903X
Ritika GuptaDepartment of Physics, The State University of New York at Buffalo, Buffalo, NY, USA.
Priya R BanerjeeDepartment of Biological Sciences, The State University of New York at Buffalo, Buffalo, NY, USA. prbanerj@buffalo.edu.ORCID 0000-0002-6169-1461

Funding

Quantifying Physiologic and Pathologic Viscoelastic Phases of Biomolecular Condensates by Correlative Force and Fluorescence MicroscopyR35GM138186 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BANERJEE, PRIYA R. · 2020 to 2025
$4.4M
NIGMS NIH HHS R35 GM138186
6 · The paper itself

Abstract

RNA-driven condensation plays a central role in organizing and regulating ribonucleoprotein granules within cells. Disruptions to this process-such as the aberrant aggregation of repeat-expanded RNA-are associated with numerous neurological disorders. Here we study the role of biomolecular condensates in irreversible RNA aggregation. We find that physiologically relevant and disease-associated repeat RNAs spontaneously undergo an age-dependent percolation transition inside multi-component condensates to form nanoscale clusters. Homotypic RNA clusters drive the emergence of multi-phasic condensate structures, with an RNA-rich solid core surrounded by an RNA-depleted fluid shell. The timescale of RNA clustering is determined by sequence, secondary structure and repeat length. Importantly, G3BP1, the core scaffold of stress granules, introduces heterotypic buffering to homotypic RNA-RNA interactions and prevents RNA clustering in an ATP-independent manner. Our work suggests that biomolecular condensates can act as sites for RNA aggregation and highlights the chaperone-like function of RNA-binding proteins against aberrant RNA phase transitions.

Indexed as

Biomolecular CondensatesRNADNA HelicasesHumansNucleic Acid ConformationPhase TransitionPoly-ADP-Ribose Binding ProteinsRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsDNA HelicasesG3BP1 protein, humanPoly-ADP-Ribose Binding ProteinsRNARNA-Binding ProteinsRNA HelicasesRNA Recognition Motif Proteins

Identifiers

PMID40603603
PMCPMC12714487

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.