Evidence map›Paper›PMID 40601718›Full record

ArticlePLoS genetics2025

Cellular imbalance of specific RNA-binding proteins associates with harmful R-loops.

José Antonio Mérida-Cerro, Guillaume Chevreux, Benoit Palancade, Ana G Rondón, Andrés Aguilera

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

José Antonio Mérida-CerroCentro Andaluz de Biología Molecular y Medicina Regenerativa (CABIMER), Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID https://orcid.org/0000-0003-4636-5657
Guillaume ChevreuxUniversité Paris Cité, CNRS, Institut Jacques Monod, Paris, France.ORCID https://orcid.org/0000-0003-3452-2125
Benoit PalancadeUniversité Paris Cité, CNRS, Institut Jacques Monod, Paris, France.ORCID https://orcid.org/0000-0002-3894-9735
Ana G RondónCentro Andaluz de Biología Molecular y Medicina Regenerativa (CABIMER), Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID https://orcid.org/0000-0002-9481-1255
Andrés AguileraCentro Andaluz de Biología Molecular y Medicina Regenerativa (CABIMER), Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID https://orcid.org/0000-0003-4782-1714

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding how the assembly of nascent mRNA into a ribonucleoprotein (mRNP) influences R-loop homeostasis is crucial for gaining insight into the cellular mechanisms that prevent genome instability. Here, we identify three RNA-binding proteins, Rie1, Rim4 and She2, whose expression levels are important to limit R-loop accumulation and, thus, to prevent DNA damage. Interestingly, Rim4 and She2 are overrepresented in CBP80-containing mRNPs formed in the absence of THO. In addition, we found that an excess of the RNA exosome component Dis3 impairs its function, promoting R-loops, particularly from non-coding RNAs, which cause genomic instability. Our results indicate that changes in the availability of different RBPs or RNAs, causes R-loop-mediated DNA damage in the cell. These results may help to understand the mechanism that promotes cancer, as several RBPs are overexpressed in different types of tumors.

Indexed as

R-Loop StructuresRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsDNA DamageExosome Multienzyme Ribonuclease ComplexGenomic InstabilityHumansRibonucleoproteinsRNA, MessengerSaccharomyces cerevisiaeExosome Multienzyme Ribonuclease ComplexRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID40601718
PMCPMC12251259

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.