Evidence map›Paper›PMID 40598761›Full record

ArticlePlant biotechnology journal2025

Deletion of the gene encoding the magnesium chelatase I subunit resulted in a novel wheat leaf colour mutant.

Fei Qi, Piyi Xing, Yinchu Sun, Yinguang Bao, Honggang Wang, Xingfeng Li

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fei QiState Key Laboratory of Wheat Improvement, Shandong Agricultural University, Taian, Shandong, China.ORCID https://orcid.org/0009-0003-7333-823X
Piyi XingAgronomy College, Shandong Agricultural University, Taian, Shandong, China.
Yinchu SunState Key Laboratory of Wheat Improvement, Shandong Agricultural University, Taian, Shandong, China.
Yinguang BaoState Key Laboratory of Wheat Improvement, Shandong Agricultural University, Taian, Shandong, China.
Honggang WangAgronomy College, Shandong Agricultural University, Taian, Shandong, China.
Xingfeng LiState Key Laboratory of Wheat Improvement, Shandong Agricultural University, Taian, Shandong, China.ORCID https://orcid.org/0000-0003-1943-7328

Funding

Agricultural Variety Improvement Project of Shandong Province 2021LZGC02502National Key Research and Development Program of China 2023YFD1201001
6 · The paper itself

Abstract

Leaf colour mutants are ideal germplasm resources for investigating the mechanisms of chlorophyll (Chl) synthesis, chloroplast development and photosynthesis. In this study, we obtained a yellow-leaf mutant, designated SN288-2. The variant presented a yellow-leaf phenotype and halted the development of chloroplasts at the seedling stage, with reduced accumulation of Chl. The yellow-leaf phenotype reverted to the normal phenotype in the wheat revival stage. In addition, the ratio of the crucial Chl precursors protoporphyrin IX (Proto IX) and Mg-protoporphyrin IX (Mg-Proto IX) was relatively high in yellow leaves. Bulked segregant analysis sequencing (BSA-Seq) revealed that the aberrant phenotype was controlled by two recessive genes located on chromosomes 7A and 7D, designated Y1-7A and Y2-7D, respectively. Subsequent research focused on Y1-7A. We identified TraesCS7A03G1163900 as a viable candidate for Y1-7A, encoding a major subunit of Mg-chelatase that is essential for Chl synthesis. Whole-genome resequencing and Sanger sequencing revealed a 5.3 kb deletion on the long arm of chromosome 7A in SN388-2 that encompasses the entire Y1-7A sequence. Quantitative real-time PCR (qRT-PCR) revealed that the Y1-7A gene was predominantly expressed in green tissues and that the encoded protein was localized within the chloroplast. Moreover, weighted gene coexpression network analysis (WGCNA) revealed a gene module associated with leaf development and Chl content restoration. Consequently, these results provide a new theory regarding the regulation of Chl synthesis and chloroplast development. Overall, the loss of Y1-7A impaired the function of Mg-chelatase and blocked the conversion of Proto IX to Mg-Proto IX.

Indexed as

LyasesPlant LeavesPlant ProteinsTriticumChlorophyllChloroplastsGene DeletionGene Expression Regulation, PlantMutationPhenotypePigmentationProtoporphyrinsChlorophyllLyasesmagnesium chelatasePlant ProteinsProtoporphyrinsBSA‐Seqcommon wheatdeletionprotoporphyrin IXWGCNAyellow‐leaf variant

Identifiers

PMID40598761
PMCPMC12483974

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.