Evidence map›Paper›PMID 40598098›Full record

ArticleBMC biotechnology2025

Comparison of active site mutations at subsite + 2 of Anoxybacillus ayderensis A9 β-glucosidase for hydrolysis of pNPG and polydatin.

Numan Saleh Zada, Ali Osman Belduz, Abdulrahman H Alessa, Halil Ibrahim Güler, Mine Karaoğlan, Malik Badshah, Aamer Ali Shah, Aasia Kalsoom, Samiullah Khan

Abstract readComparative Study
In one paragraph

Article in BMC biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Numan Saleh ZadaDepartment of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
Ali Osman BelduzDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, Trabzon, 61080, Turkey.
Abdulrahman H AlessaDepartment of Biology, Faculty of Science, University of Tabuk, Tabuk, Saudi Arabia.
Halil Ibrahim GülerDepartment of Molecular Biology and Genetics, Faculty of Sciences, Karadeniz Technical University, Trabzon, 61080, Turkey.
Mine KaraoğlanDepartment of Biology, Faculty of Sciences, Karadeniz Technical University, Trabzon, 61080, Turkey.
Malik BadshahDepartment of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
Aamer Ali ShahDepartment of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
Aasia KalsoomPakistan Council of Scientific and Industrial Research, Islamabad, Pakistan.
Samiullah KhanDepartment of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan. samikhan@qau.edu.pk.

Funding

Pakistan Science Foundation PSF-TUBITAK/Med/C-QAU (15)Scientific and Technological Research Council of Turkey, Turkey No. 118Z494
6 · The paper itself

Abstract

β-glucosidase from Anoxybacillus ayderensis A9 (BglA9) is a potent enzyme for enzymatic hydrolysis of polydatin to resveratrol. Based on structural and bioinformatics analysis an area near + 2 subsite of the active site pocket of BglA9 was selected and single point mutations were introduced with the aim to enhance the catalytic efficiency of the enzyme towards pNPG and polydatin. The active site region selected for mutations is non-conserved between different glycoside hydrolase family 1 (GH1) enzymes and is located at the end of β-strand 6. The changes introduced in the active site residues were L221S, N222S and G226Q. The E. coli BL21 (DE3) cells were used for the expression of mutant proteins and purification was achieved by Ni-NTA column chromatography. The thermal and pH stability was retained in all the mutants. The proteins with mutated residue resulted in variations in K

Indexed as

Bacterial Proteinsbeta-GlucosidaseGlucosidesStilbenesCatalytic DomainEnzyme StabilityEscherichia coliHydrolysisKineticsMolecular Docking SimulationMutagenesis, Site-DirectedMutationSubstrate SpecificityBacterial Proteinsbeta-GlucosidaseGlucosidespolydatinStilbenesActive site mutationsAnoxybacillus ayderensis A9PolydatinRational designingΒ-glucosidase

Identifiers

PMID40598098
PMCPMC12211328

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.