Evidence map›Paper›PMID 40597605›Full record

ArticleBMC genomics2025

Dynamic transcriptome landscape of oat grain development.

Ting Wang, Bing Han

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ting WangInner Mongolia Agricultural University, Hohhot, China.
Bing HanInner Mongolia Agricultural University, Hohhot, China. hb_nmg@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOats are widely consumed throughout the world because of their nutritive value, with their yield and quality being associated with the developmental process of grain development. However, the underlying molecular mechanisms of the transcriptional dynamics of this process have not yet been fully elucidated. In this study, RNA-seq was performed to investigate the transcriptional dynamics and identify the key genes involved in the development of the oat grain at four different developmental stages.

resultsA total of 33,197 differentially expressed genes (DEGs), including 1,308 differentially expressed transcription factors (TFs) were identified, 398 DEGs associated with plant hormone signal transduction and 107 DEGs associated with starch and sucrose metabolism. The main concern of this study was to include those genes associated with hormone signaling, and the sucrose and starch metabolism pathways.

conclusionsThe results of this study provide valuable insights into the genetic resources affecting the molecular mechanism underlying the development of the oat grain, as well as establishing a strong theoretical foundation for its improvement.

Indexed as

AvenaEdible GrainTranscriptomeGene Expression ProfilingGene Expression Regulation, PlantPlant ProteinsStarchSucroseTranscription FactorsPlant ProteinsStarchSucroseTranscription FactorsDEGsGrain developmentHormoneOatsRNA-SeqStarch

Identifiers

PMID40597605
PMCPMC12211225

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.