Evidence map›Paper›PMID 40597132›Full record

ArticleBMC biology2025

Deep learning-based dipeptidyl peptidase IV inhibitor screening, experimental validation, and GaMD/LiGaMD analysis.

Yi He, Yan Zhang, Minghao Liu, Jiaying Li, Wannan Li, Weiwei Han

Abstract read
In one paragraph

Article in BMC biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yi He *Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China.
Yan Zhang *Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China.
Minghao LiuKey Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China.
Jiaying LiKey Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China.
Wannan LiKey Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China. liwannan@jlu.edu.cn.
Weiwei HanKey Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Edmond Fischer Cell Signaling Laboratory, College of Life Sciences, Jilin University, 2699 Qianjin Street, Changchun, 130012, China. weiweihan@jlu.edu.cn.

Funding

Science and Technology Development Program Project in Jilin Province of China 20230508072RC
6 · The paper itself

Abstract

backgroundDipeptidyl peptidase-4 (DPP4) is considered a crucial enzyme in type 2 diabetes (T2D) treatment, targeted by inhibitors due to its role in cleaving glucagon-like peptide-1 (GLP-1). In this study, a novel DPP4 inhibitor screening strategy was developed, which significantly improved screening accuracy.

resultsIn this study, a DPP4 inhibitor screening method was developed, integrating receptor-based ConPLex, ligand-based KPGT, and molecular docking to enhance screening accuracy. Using this approach, four potential drugs were identified from the FDA database, achieving a 100% hit rate. Among these, Isavuconazonium demonstrated the highest inhibitory activity (IC

conclusionsOur study offers a robust approach and valuable insights for the development of DPP4 inhibitors, providing an effective means to investigate the binding and dissociation mechanisms between proteins and compounds.

Indexed as

Deep LearningDipeptidyl Peptidase 4Dipeptidyl-Peptidase IV InhibitorsDiabetes Mellitus, Type 2Drug Evaluation, PreclinicalHumansLigandsMolecular Docking SimulationMolecular Dynamics SimulationDipeptidyl Peptidase 4Dipeptidyl-Peptidase IV InhibitorsLigandsDPP4 inhibitorMolecular dynamics simulationProtein-ligand interactions

Identifiers

PMID40597132
PMCPMC12211148

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.