Evidence map›Paper›PMID 40596553›Full record

ArticleScientific reports2025

Chemotherapy treatment alters DNA methylation patterns in the prefrontal cortex of female rat brain.

Shami Chakrabarti, Chanchal Wagh, Ciara Bagnall-Moreau, Fathema Uddin, Joshua Reiser, Kaliris Salas-Ramirez, Tim Ahles, Karen Hubbard

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shami ChakrabartiDepartment of Biology, The City College of New York, New York, NY, 10031, USA.
Chanchal WaghDepartment of Biology, The City College of New York, New York, NY, 10031, USA.
Ciara Bagnall-MoreauDepartment of Biology, The City College of New York, New York, NY, 10031, USA.
Fathema UddinDepartment of Biology, The City College of New York, New York, NY, 10031, USA.
Joshua ReiserDepartment of Biology, The City College of New York, New York, NY, 10031, USA.
Kaliris Salas-RamirezDepartment of Molecular, Cellular and Biomedical Sciences, CUNY School of Medicine, New York, NY, 10031, USA.
Tim AhlesDepartment of Psychiatry and Behavioral Sciences, Memorial Sloan Kettering Cancer Center, New York, NY, 10022, USA.
Karen HubbardDepartment of Biology, The City College of New York, New York, NY, 10031, USA. khubbard@ccny.cuny.edu.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Training and Career Development CoreU54CA132378 · NCI · CITY COLLEGE OF NEW YORK · PI Bao Q Vuong · 2008 to 2026
$28.9M
Training and Career Development and Education CoreU54CA137788 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ADRIANA ESPINOSA, FRANCESCA M GANY · 2008 to 2026
$28.1M
VOLTAGE GATING OF ION CHANNELS--SIMULATIONS AND AB INITIO CALCULATIONSS06GM008168 · NIGMS · CITY COLLEGE OF NEW YORK · PI BIKSON, MAROM · 1989 to 2010
$17.6M
Cellular/Molecular Basis of Development: Research CenterG12MD007603 · NIMHD · CITY COLLEGE OF NEW YORK · PI PEZZANO, MARK · 2012 to 2017
$11.5M
NCI NIH HHS P30 CA008748NCI NIH HHS U54 CA132378NCI NIH HHS U54 CA137788NIGMS NIH HHS S06 GM008168NIH/MBRS RISE GM08168NIH/NCI U54CA132378/U54 CA137788NIMHD NIH HHS G12 MD007603
6 · The paper itself

Abstract

Chemotherapy can cause several long-term side effects that can affect cancer survivors' quality of life-, notably cognitive decline in response to select chemotherapeutic agents. Studies using both human patients and animal models have been employed to determine the regions of the brain that are subject to the most considerable changes, furthermore, elucidating possible molecular mechanisms of chemotherapy-induced cognitive impairment (CICI). However, the reason behind the differences in symptoms and duration of CICI between patients have yet to be identified. This study focused on understanding whether the systemic delivery of doxorubicin and cyclophosphamide (AC chemotherapeutics) causes any epigenetic factors to change in the female rat prefrontal cortex (PFC), possibly providing an insight into the variability of clinical manifestations of CICI. We evaluated DNA methylation levels and patterns in the PFC after AC-chemotherapy administration. We also demonstrated changes in histone deacetylase and acetyl transferase activity levels in the murine PFC in response to treatment. Despite no change in the global DNA methylation level, we found that several genes related to neuronal development and maintenance were differentially methylated in the promoter and exon regions in the rat PFC. Our study showed a significant increase in the expression of the de novo DNA methyl transferase DNMT3a compared to the control.

Indexed as

Antineoplastic AgentsCyclophosphamideDNA MethylationDoxorubicinPrefrontal CortexAnimalsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AEpigenesis, GeneticFemaleMiceRatsAntineoplastic AgentsCyclophosphamideDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADoxorubicinChemotherapy-induced cognitive impairmentDNA methylationEpigeneticsHistone acetyl transferaseHistone deacetylasePrefrontal cortex

Identifiers

PMID40596553
PMCPMC12217081

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.